RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
UPK3A-202ENST00000396082 BIRC6Q9NR09 4857 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 FAM74A7A6NL05 159 aa12.17□□□□□ -0.46
UPK3A-202ENST00000396082 PAX4O43316 350 aa12.17□□□□□ -0.46
UPK3A-202ENST00000396082 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
UPK3A-202ENST00000396082 EIF5AP63241 154 aaKnown RBP12.17□□□□□ -0.46
UPK3A-202ENST00000396082 SAPCD1Q5SSQ6 148 aa12.17□□□□□ -0.46
UPK3A-202ENST00000396082 Q6ZR54 194 aa12.17□□□□□ -0.46
UPK3A-202ENST00000396082 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
UPK3A-202ENST00000396082 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 PEX7O00628 323 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 SEC11BP0C7V7 166 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 FHITP49789 147 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 SLAQ13239 276 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 FAM213BQ8TBF2 198 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
UPK3A-202ENST00000396082 DNAH10Q8IVF4 4471 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 UMAD1C9J7I0 102 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 M0R2P5 195 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
UPK3A-202ENST00000396082 ZNF80P51504 273 aaPredicted RBP12.15□□□□□ -0.46
UPK3A-202ENST00000396082 CST9LP1Q5W188 147 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 RASL10AQ92737 203 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 HIST1H2BAQ96A08 127 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 ARL2-SNX15V9GYD0 113 aa12.15□□□□□ -0.46
UPK3A-202ENST00000396082 A0A096LPF7 62 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 NBDYA0A0U1RRE5 68 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 SFTA3P0C7M3 94 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 HHLA3Q9XRX5 114 aa12.14□□□□□ -0.47
UPK3A-202ENST00000396082 A0A1B0GV50 99 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 RTL8CO15255 209 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 TPT1P13693 172 aaKnown RBP12.13□□□□□ -0.47
UPK3A-202ENST00000396082 CRYBA4P53673 196 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 UBE2G1P62253 170 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 FHL2Q14192 279 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 ESRGQ1W209 222 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 Q86TA4 180 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 FRAS1Q86XX4 4008 aa12.13□□□□□ -0.47
UPK3A-202ENST00000396082 PCNPQ8WW12 178 aaKnown RBP12.12□□□□□ -0.47
UPK3A-202ENST00000396082 Q9H8V8 135 aa12.12□□□□□ -0.47
UPK3A-202ENST00000396082 C11orf21Q9P2W6 132 aa12.12□□□□□ -0.47
UPK3A-202ENST00000396082 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
UPK3A-202ENST00000396082 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
UPK3A-202ENST00000396082 C9JCJ5 164 aa12.11□□□□□ -0.47
UPK3A-202ENST00000396082 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
UPK3A-202ENST00000396082 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
UPK3A-202ENST00000396082 PAGE4O60829 102 aa12.1□□□□□ -0.47
UPK3A-202ENST00000396082 AKR1C3P42330 323 aa12.1□□□□□ -0.47
UPK3A-202ENST00000396082 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
UPK3A-202ENST00000396082 TTC32Q5I0X7 151 aa12.1□□□□□ -0.47
UPK3A-202ENST00000396082 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
UPK3A-202ENST00000396082 FMC1Q96HJ9 113 aa12.1□□□□□ -0.47
UPK3A-202ENST00000396082 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
UPK3A-202ENST00000396082 FABP5P3A8MUU1 101 aa12.09□□□□□ -0.47
UPK3A-202ENST00000396082 H2AFB1P0C5Y9 115 aa12.09□□□□□ -0.47
UPK3A-202ENST00000396082 S100A4P26447 101 aaKnown RBP12.09□□□□□ -0.47
UPK3A-202ENST00000396082 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
UPK3A-202ENST00000396082 SRIP30626 198 aa12.08□□□□□ -0.48
UPK3A-202ENST00000396082 TCTE3Q8IZS6 198 aa12.08□□□□□ -0.48
UPK3A-202ENST00000396082 C6orf223Q8N319 242 aa12.08□□□□□ -0.48
UPK3A-202ENST00000396082 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
UPK3A-202ENST00000396082 ORM1P02763 201 aa12.07□□□□□ -0.48
UPK3A-202ENST00000396082 GYPEP15421 78 aa12.07□□□□□ -0.48
UPK3A-202ENST00000396082 EIF5AL1Q6IS14 154 aaKnown RBP12.07□□□□□ -0.48
UPK3A-202ENST00000396082 NEGR1Q7Z3B1 354 aa12.07□□□□□ -0.48
UPK3A-202ENST00000396082 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
UPK3A-202ENST00000396082 IGKV3D-20A0A0C4DH25 116 aa12.06□□□□□ -0.48
UPK3A-202ENST00000396082 K7EQD1 137 aa12.06□□□□□ -0.48
UPK3A-202ENST00000396082 ASIPP42127 132 aa12.06□□□□□ -0.48
UPK3A-202ENST00000396082 LGALSLQ3ZCW2 172 aaPredicted RBP12.06□□□□□ -0.48
UPK3A-202ENST00000396082 Q6ZNX1 250 aa12.06□□□□□ -0.48
UPK3A-202ENST00000396082 ZC2HC1AQ96GY0 325 aa12.06□□□□□ -0.48
UPK3A-202ENST00000396082 B4DEV8 164 aa12.05□□□□□ -0.48
UPK3A-202ENST00000396082 M0R036 132 aa12.05□□□□□ -0.48
UPK3A-202ENST00000396082 NXPH4O95158 308 aa12.05□□□□□ -0.48
UPK3A-202ENST00000396082 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
UPK3A-202ENST00000396082 FAM162BQ5T6X4 162 aa12.05□□□□□ -0.48
UPK3A-202ENST00000396082 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
UPK3A-202ENST00000396082 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 TRBV6-1A0A0K0K1D8 114 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 SIVA1O15304 175 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 SH2D1AO60880 128 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 LTAP01374 205 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 C1QBP02746 253 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 RAB5CP51148 216 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 LYPD5Q6UWN5 251 aa12.04□□□□□ -0.48
UPK3A-202ENST00000396082 IGHV3-73A0A0B4J1V6 119 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms