RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 NOTCH3Q9UM47 2321 aa14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 SPINK4O60575 86 aa14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 AMBPP02760 352 aa14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 RPL35AP18077 110 aaKnown RBP14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 ANXA2RQ3ZCQ2 193 aa14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 FAM159AQ6UWV7 190 aa14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 PGLYRP4Q96LB8 373 aa14.99□□□□□ -0.01
VCPKMT-202ENST00000395860 TPPP3Q9BW30 176 aa14.98□□□□□ -0.01
VCPKMT-202ENST00000395860 FOXA3P55318 350 aaPredicted RBP14.98□□□□□ -0.01
VCPKMT-202ENST00000395860 RIPPLY3P57055 190 aa14.98□□□□□ -0.01
VCPKMT-202ENST00000395860 ZNF575Q86XF7 245 aa14.98□□□□□ -0.01
VCPKMT-202ENST00000395860 SRD5A3Q9H8P0 318 aa14.98□□□□□ -0.01
VCPKMT-202ENST00000395860 XCL2Q9UBD3 114 aa14.98□□□□□ -0.01
VCPKMT-202ENST00000395860 INSP01308 110 aa14.97□□□□□ -0.01
VCPKMT-202ENST00000395860 RAB5AP20339 215 aa14.97□□□□□ -0.01
VCPKMT-202ENST00000395860 Q8N1Y9 231 aa14.97□□□□□ -0.01
VCPKMT-202ENST00000395860 KCNS1Q96KK3 526 aa14.97□□□□□ -0.01
VCPKMT-202ENST00000395860 RBMY1A1P0DJD3 496 aaKnown RBP14.96□□□□□ -0.01
VCPKMT-202ENST00000395860 RBMY1CP0DJD4 496 aa14.96□□□□□ -0.01
VCPKMT-202ENST00000395860 RBMY1FQ15415 496 aaKnown RBP14.96□□□□□ -0.01
VCPKMT-202ENST00000395860 MORN3Q6PF18 240 aaPredicted RBP14.96□□□□□ -0.01
VCPKMT-202ENST00000395860 FER1L6-AS1Q8NA97 138 aa14.96□□□□□ -0.01
VCPKMT-202ENST00000395860 ZMAT5Q9UDW3 170 aaKnown RBP14.96□□□□□ -0.01
VCPKMT-202ENST00000395860 EGFEM1PQ0D2K5 195 aa14.96□□□□□ -0.02
VCPKMT-202ENST00000395860 MRPL54Q6P161 138 aaKnown RBP14.96□□□□□ -0.02
VCPKMT-202ENST00000395860 IGLC6P0CF74 106 aa14.95□□□□□ -0.02
VCPKMT-202ENST00000395860 RPS10P46783 165 aaKnown RBP14.95□□□□□ -0.02
VCPKMT-202ENST00000395860 LYZL1Q6UWQ5 148 aa14.95□□□□□ -0.02
VCPKMT-202ENST00000395860 C20orf144Q9BQM9 153 aa14.95□□□□□ -0.02
VCPKMT-202ENST00000395860 IGHV1OR15-1A0A075B7D0 117 aa14.94□□□□□ -0.02
VCPKMT-202ENST00000395860 GNRH2O43555 120 aa14.94□□□□□ -0.02
VCPKMT-202ENST00000395860 TYMSP04818 313 aa14.94□□□□□ -0.02
VCPKMT-202ENST00000395860 KRTAP10-11P60412 298 aa14.94□□□□□ -0.02
VCPKMT-202ENST00000395860 TDRG1Q3Y452 100 aa14.94□□□□□ -0.02
VCPKMT-202ENST00000395860 BORCS7Q96B45 105 aa14.94□□□□□ -0.02
VCPKMT-202ENST00000395860 S100A4P26447 101 aaKnown RBP14.93□□□□□ -0.02
VCPKMT-202ENST00000395860 ASIPP42127 132 aa14.93□□□□□ -0.02
VCPKMT-202ENST00000395860 C1QTNF4Q9BXJ3 329 aa14.93□□□□□ -0.02
VCPKMT-202ENST00000395860 G3V4G9 280 aa14.93□□□□□ -0.02
VCPKMT-202ENST00000395860 A0A1B0GUT8 65 aa14.92□□□□□ -0.02
VCPKMT-202ENST00000395860 H3BVH4 76 aa14.92□□□□□ -0.02
VCPKMT-202ENST00000395860 ARMS2P0C7Q2 107 aa14.92□□□□□ -0.02
VCPKMT-202ENST00000395860 CTRLP40313 264 aa14.92□□□□□ -0.02
VCPKMT-202ENST00000395860 ATP5L2Q7Z4Y8 100 aa14.92□□□□□ -0.02
VCPKMT-202ENST00000395860 LINC01587Q99440 93 aa14.92□□□□□ -0.02
VCPKMT-202ENST00000395860 F2Z2F3 143 aa14.91□□□□□ -0.02
VCPKMT-202ENST00000395860 TMEM208Q9BTX3 173 aa14.91□□□□□ -0.02
VCPKMT-202ENST00000395860 TP53TG3Q9ULZ0 132 aa14.91□□□□□ -0.02
VCPKMT-202ENST00000395860 GIG44P09565 113 aaPredicted RBP14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 FRMD6-AS1P0C7T7 363 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 HTN1P15515 57 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 SSTP61278 116 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 RIGQ13278 110 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 DNLZQ5SXM8 178 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 SAMD5Q5TGI4 173 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 CSTL1Q9H114 145 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 TIMM8BQ9Y5J9 83 aaPredicted RBP14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 LOC102724200A0A096LPH7 203 aaPredicted RBP14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 MUC21A0A0G2JKD1 596 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 MUC21A0A140T8X8 626 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 CBY3A6NI87 242 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 RASL11AQ6T310 242 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 TMEM256Q8N2U0 113 aa14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 SSBP4Q9BWG4 385 aaPredicted RBP14.9□□□□□ -0.02
VCPKMT-202ENST00000395860 TRGV11A0A075B6L2 103 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 SNAI2O43623 268 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 OR5AL1P0C617 328 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 CAMPP49913 170 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 RAB4BP61018 213 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 HBBP68871 147 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 COX19Q49B96 90 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 C1orf158Q8N1D5 194 aa14.89□□□□□ -0.03
VCPKMT-202ENST00000395860 IGHV3OR16-12A0A075B7B8 117 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 A0A1B0GXF2 115 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 MED14OSP0DP75 135 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 WDR73Q6P4I2 378 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 ANK2Q01484 3957 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 RNASE3P12724 160 aaKnown RBP14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 GOLT1BQ9Y3E0 138 aa14.88□□□□□ -0.03
VCPKMT-202ENST00000395860 IGHV3-16A0A0C4DH30 117 aa14.87□□□□□ -0.03
VCPKMT-202ENST00000395860 OR10AG1Q8NH19 301 aa14.87□□□□□ -0.03
VCPKMT-202ENST00000395860 LINC00467Q9BRT7 94 aa14.87□□□□□ -0.03
VCPKMT-202ENST00000395860 GNB1LQ9BYB4 327 aa14.87□□□□□ -0.03
VCPKMT-202ENST00000395860 CNFNQ9BYD5 112 aa14.87□□□□□ -0.03
VCPKMT-202ENST00000395860 TRAPPC1Q9Y5R8 145 aa14.87□□□□□ -0.03
VCPKMT-202ENST00000395860 A0A1B0GW15 77 aa14.86□□□□□ -0.03
VCPKMT-202ENST00000395860 IGHV4-30-4P0DP06 118 aa14.86□□□□□ -0.03
VCPKMT-202ENST00000395860 NTF3P20783 257 aa14.86□□□□□ -0.03
VCPKMT-202ENST00000395860 TWIST1Q15672 202 aa14.86□□□□□ -0.03
VCPKMT-202ENST00000395860 PHLDA3Q9Y5J5 127 aa14.86□□□□□ -0.03
VCPKMT-202ENST00000395860 CMYA5Q8N3K9 4069 aa14.86□□□□□ -0.03
VCPKMT-202ENST00000395860 TRGC2P03986 189 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 S100A8P05109 93 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 APOC4P55056 127 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 CACNG7P62955 275 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 SPANXN1Q5VSR9 72 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 TMEM136Q6ZRR5 245 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 CSNK1G2-AS1Q8NCQ2 148 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 FRZBQ92765 325 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms