RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 GPHB5Q86YW7 130 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 TMEM183AQ8IXX5 376 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 BLNKQ8WV28 456 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 DERL1Q9BUN8 251 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 GFRA4Q9GZZ7 299 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 SOX21Q9Y651 276 aaPredicted RBP4.72□□□□□ -1.65
AFP-202ENST00000395792 PLXNB1O43157 2135 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 RELNP78509 3460 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 TRBV20OR9-2A0A075B6H5 130 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 LINC01548A6NM66 108 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 LYRM9A8MSI8 78 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 APOHP02749 345 aaPredicted RBP4.72□□□□□ -1.65
AFP-202ENST00000395792 TFPI2P48307 235 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 GAGE13Q4V321 117 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 MYOZ3Q8TDC0 251 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 ZNF462Q96JM2 2506 aa4.72□□□□□ -1.65
AFP-202ENST00000395792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.71□□□□□ -1.652e-24■■■■■ 28.4
AFP-202ENST00000395792 USP9XQ93008 2570 aaPredicted RBP4.71□□□□□ -1.65
AFP-202ENST00000395792 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 DIRC3C9JPN6 131 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 PHOX2AO14813 284 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 MT-ND6P03923 174 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 RPS10P46783 165 aaKnown RBP4.71□□□□□ -1.65
AFP-202ENST00000395792 FAM106AQ4KMX7 169 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 IBA57Q5T440 356 aaKnown RBP4.71□□□□□ -1.65
AFP-202ENST00000395792 GNB4Q9HAV0 340 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 V9GYV3 84 aa4.71□□□□□ -1.65
AFP-202ENST00000395792 DCHS2Q6V1P9 2916 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 CLPSL1A2RUU4 121 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 LGALS9O00182 355 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 CXCL1P09341 107 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 APOC4P55056 127 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 BLCAPP62952 87 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 ATP5L2Q7Z4Y8 100 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 OR4X2Q8NGF9 303 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 LENEPQ9Y5L5 61 aa4.71□□□□□ -1.66
AFP-202ENST00000395792 A8MWL6 223 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 HSD52Q0P140 79 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 JOSD1Q15040 202 aaPredicted RBP4.7□□□□□ -1.66
AFP-202ENST00000395792 Q6AWC8 147 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 Q86TA4 180 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 FER1L6-AS1Q8NA97 138 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 KIR2DL4Q99706 377 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 GNB1LQ9BYB4 327 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 ZNF702PQ9H963 129 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
AFP-202ENST00000395792 C19orf71A6NCJ1 209 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 IZUMO1RA6ND01 250 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 TSPOP30536 169 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 SYT8Q8NBV8 401 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 OR10D4PQ8NGN7 298 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 SPATA3Q8NHX4 192 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 TSKUQ8WUA8 353 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 SMAD5-AS1Q9Y6J3 95 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 WNK2Q9Y3S1 2297 aa4.7□□□□□ -1.66
AFP-202ENST00000395792 ZNF705GA8MUZ8 300 aaPredicted RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 J3QR89 54 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 LGALS1P09382 135 aaKnown RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 MGST1P10620 155 aaKnown RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 FOXA3P55318 350 aaPredicted RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 CIARTQ8N365 385 aaPredicted RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 WFDC11Q8NEX6 87 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 C16orf95Q9H693 158 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 IGHV7-4-1A0A0J9YVY3 117 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 GAGE12HA6NDE8 117 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 OVOL1O14753 267 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 IGLV2-11P01706 119 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 CT45A10P0DMU9 189 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 BATFQ16520 125 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 COA6Q5JTJ3 125 aaKnown RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 Q75L30 129 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 GBGT1Q8N5D6 347 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 SIGLECL1Q8N7X8 197 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 RPP21Q9H633 154 aaKnown RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 DAZ1Q9NQZ3 744 aaKnown RBP4.69□□□□□ -1.66
AFP-202ENST00000395792 S4R3C0 116 aa4.69□□□□□ -1.66
AFP-202ENST00000395792 TRAV2A0A0B4J234 112 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 P01737 135 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 LCN12Q6JVE5 192 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 EXOC3-AS1Q8N2X6 119 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 MAPK1IP1LQ8NDC0 245 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 PLEKHB2Q96CS7 222 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 PRADC1Q9BSG0 188 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 SERTAD4Q9NUC0 356 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 FLNCQ14315 2725 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 GAGE12BA1L429 117 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 RNASE1P07998 156 aaKnown RBP4.68□□□□□ -1.66
AFP-202ENST00000395792 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 TRAPPC1Q9Y5R8 145 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 MYO18BQ8IUG5 2567 aa4.68□□□□□ -1.66
AFP-202ENST00000395792 AKAP6Q13023 2319 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms