RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 Q6ZTI0 123 aa14.4□□□□□ -0.1
CLDN3-201ENST00000395145 TMEM183AQ8IXX5 376 aa14.4□□□□□ -0.1
CLDN3-201ENST00000395145 KCNS1Q96KK3 526 aa14.4□□□□□ -0.1
CLDN3-201ENST00000395145 C18orf15Q96N68 181 aa14.4□□□□□ -0.1
CLDN3-201ENST00000395145 TXNDC17Q9BRA2 123 aa14.4□□□□□ -0.1
CLDN3-201ENST00000395145 NAGKQ9UJ70 344 aa14.4□□□□□ -0.1
CLDN3-201ENST00000395145 SCO2A0A1W2PP80 73 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 GAGE12BA1L429 117 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 GAGE7O76087 117 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 LTAP01374 205 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 S100A9P06702 114 aaKnown RBP14.39□□□□□ -0.11
CLDN3-201ENST00000395145 GAGE12FP0CL80 117 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 GAGE12GP0CL81 117 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 GAGE12IP0CL82 117 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 NDUFAF3Q9BU61 184 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 MDFICQ9P1T7 246 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 C11orf21Q9P2W6 132 aa14.39□□□□□ -0.11
CLDN3-201ENST00000395145 LGALS9BQ3B8N2 356 aa14.38□□□□□ -0.11
CLDN3-201ENST00000395145 SDF2L1Q9HCN8 221 aa14.38□□□□□ -0.11
CLDN3-201ENST00000395145 TRGV1A0A0A0MS02 117 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 IGHV3-16A0A0C4DH30 117 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 IFNA1P01562 189 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 TYMSP04818 313 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 BLOC1S1P78537 153 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 LGALS9CQ6DKI2 356 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 C11orf52Q96A22 123 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 SPXQ9BT56 116 aa14.37□□□□□ -0.11
CLDN3-201ENST00000395145 GNRH2O43555 120 aa14.36□□□□□ -0.11
CLDN3-201ENST00000395145 ZC2HC1AQ96GY0 325 aa14.36□□□□□ -0.11
CLDN3-201ENST00000395145 RYR2Q92736 4967 aa14.36□□□□□ -0.11
CLDN3-201ENST00000395145 MUC4Q99102 2169 aa14.35□□□□□ -0.11
CLDN3-201ENST00000395145 FABP5P3A8MUU1 101 aa14.35□□□□□ -0.11
CLDN3-201ENST00000395145 F5H768 121 aa14.35□□□□□ -0.11
CLDN3-201ENST00000395145 BCL2P10415 239 aa14.35□□□□□ -0.11
CLDN3-201ENST00000395145 TAGLN2P37802 199 aaKnown RBP14.35□□□□□ -0.11
CLDN3-201ENST00000395145 TMEM88Q6PEY1 159 aa14.35□□□□□ -0.11
CLDN3-201ENST00000395145 LYPD6BQ8NI32 183 aa14.35□□□□□ -0.11
CLDN3-201ENST00000395145 LY6G6CO95867 125 aa14.34□□□□□ -0.11
CLDN3-201ENST00000395145 MEF2BQ02080 365 aaPredicted RBP14.34□□□□□ -0.11
CLDN3-201ENST00000395145 MRPL16Q9NX20 251 aaKnown RBP14.34□□□□□ -0.11
CLDN3-201ENST00000395145 TRGV2A0A075B6R0 118 aa14.33□□□□□ -0.12
CLDN3-201ENST00000395145 CRIP1P50238 77 aa14.33□□□□□ -0.12
CLDN3-201ENST00000395145 RASL10AQ92737 203 aa14.33□□□□□ -0.12
CLDN3-201ENST00000395145 MLST8Q9BVC4 326 aa14.33□□□□□ -0.12
CLDN3-201ENST00000395145 VAX2Q9UIW0 290 aa14.33□□□□□ -0.12
CLDN3-201ENST00000395145 PDE6DO43924 150 aa14.32□□□□□ -0.12
CLDN3-201ENST00000395145 ZNF674Q2M3X9 581 aa14.32□□□□□ -0.12
CLDN3-201ENST00000395145 FAM162BQ5T6X4 162 aa14.32□□□□□ -0.12
CLDN3-201ENST00000395145 C15orf53Q8NAA6 179 aa14.32□□□□□ -0.12
CLDN3-201ENST00000395145 IGKV3D-20A0A0C4DH25 116 aa14.31□□□□□ -0.12
CLDN3-201ENST00000395145 M0R2P5 195 aa14.31□□□□□ -0.12
CLDN3-201ENST00000395145 SH2D1AO60880 128 aa14.31□□□□□ -0.12
CLDN3-201ENST00000395145 HOXA5P20719 270 aa14.31□□□□□ -0.12
CLDN3-201ENST00000395145 RPL35P42766 123 aaKnown RBP14.31□□□□□ -0.12
CLDN3-201ENST00000395145 BAGE2Q86Y30 109 aa14.31□□□□□ -0.12
CLDN3-201ENST00000395145 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
CLDN3-201ENST00000395145 DERL1Q9BUN8 251 aa14.3□□□□□ -0.12
CLDN3-201ENST00000395145 VPS13DQ5THJ4 4388 aa14.3□□□□□ -0.12
CLDN3-201ENST00000395145 RNASE3P12724 160 aaKnown RBP14.29□□□□□ -0.12
CLDN3-201ENST00000395145 NHLRC2Q8NBF2 726 aa14.29□□□□□ -0.12
CLDN3-201ENST00000395145 HYDINQ4G0P3 5121 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 B4DEV8 164 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 KRBOX1C9JBD0 128 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 ORM1P02763 201 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 P0DMU3 169 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 FAM231AP0DMU4 169 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 FAM231CP0DMU5 169 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 OR5I1Q13606 314 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 DNLZQ5SXM8 178 aa14.28□□□□□ -0.12
CLDN3-201ENST00000395145 H3BNG1 76 aa14.27□□□□□ -0.13
CLDN3-201ENST00000395145 LINC01559Q495D7 138 aa14.27□□□□□ -0.13
CLDN3-201ENST00000395145 PTH2Q96A98 100 aa14.27□□□□□ -0.13
CLDN3-201ENST00000395145 TRAV26-1A0A087WT03 109 aa14.26□□□□□ -0.13
CLDN3-201ENST00000395145 ASIPP42127 132 aa14.26□□□□□ -0.13
CLDN3-201ENST00000395145 TEX261Q6UWH6 196 aa14.26□□□□□ -0.13
CLDN3-201ENST00000395145 SMIM12Q96EX1 92 aa14.26□□□□□ -0.13
CLDN3-201ENST00000395145 MED9Q9NWA0 146 aa14.26□□□□□ -0.13
CLDN3-201ENST00000395145 KMT2AQ03164 3969 aa14.26□□□□□ -0.13
CLDN3-201ENST00000395145 TRAV4A0A0B4J268 109 aa14.25□□□□□ -0.13
CLDN3-201ENST00000395145 RBFOX3A6NFN3 312 aa14.25□□□□□ -0.13
CLDN3-201ENST00000395145 CENPWQ5EE01 88 aa14.25□□□□□ -0.13
CLDN3-201ENST00000395145 ZNF506Q5JVG8 444 aa14.25□□□□□ -0.13
CLDN3-201ENST00000395145 ZNF575Q86XF7 245 aa14.25□□□□□ -0.13
CLDN3-201ENST00000395145 POM121L12Q8N7R1 296 aa14.25□□□□□ -0.13
CLDN3-201ENST00000395145 M0R036 132 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 IGLV2-8P01709 118 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 IGHV3-53P01767 116 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 S100A4P26447 101 aaKnown RBP14.24□□□□□ -0.13
CLDN3-201ENST00000395145 FHL2Q14192 279 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 VSIG2Q96IQ7 327 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 IL36BQ9NZH7 164 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 NACAE9PAV3 2078 aa14.24□□□□□ -0.13
CLDN3-201ENST00000395145 A0A0J9YY99 117 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 NUDT3O95989 172 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 SLAQ13239 276 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 ZNF876PQ49A33 203 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 PIK3CD-AS1Q5SR53 167 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 ZNF479Q96JC4 524 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 DNAH6Q9C0G6 4158 aa14.23□□□□□ -0.13
CLDN3-201ENST00000395145 TRBV20OR9-2A0A075B6H5 130 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms