RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 KDM5CP41229 1560 aa0.53□□□□□ -2.33
TRAJ3-201ENST00000390534 FOCADQ5VW36 1801 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SPEF2Q9C093 1822 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 PLXNA4Q9HCM2 1894 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 ATG2AQ2TAZ0 1938 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TET1Q8NFU7 2136 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TRBV6-4A0A1B0GX49 114 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM30CPA0ZSE6 113 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 J3QLW9 94 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SNCGO76070 127 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 DNAL4O96015 105 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKCP01834 107 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 IL5P05113 134 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 PIRTP0C851 137 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SLC25A6P12236 298 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 ADCYAP1P18509 176 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 RBP2P50120 134 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 POLR2JP52435 117 aaKnown RBP0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TPPP2P59282 170 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 UBE2G1P62253 170 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 DEFB103AP81534 67 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 IQCJQ1A5X6 159 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 MPV17LQ2QL34 196 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 PCOTHQ58A44 107 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SPRNQ5BIV9 151 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 S100A7L2Q5SY68 101 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 OR2T2Q6IF00 324 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 LYPD5Q6UWN5 251 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 VSTM2AQ8TAG5 236 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 DYNLRB2Q8TF09 96 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 COPS9Q8WXC6 57 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 LSM10Q969L4 123 aaKnown RBP0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SPTSSAQ969W0 71 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 PPP3R2Q96LZ3 170 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TCEAL7Q9BRU2 100 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 LIMD2Q9BT23 127 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 WFDC10AQ9H1F0 79 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 RERGLQ9H628 205 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 NAA60Q9H7X0 242 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM242Q9NWH2 141 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 MRPL36Q9P0J6 103 aaKnown RBP0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM14CQ9P0S9 112 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 NDUFA12Q9UI09 145 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SERP1Q9Y6X1 66 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM2Q9UHN6 1383 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SMG6Q86US8 1419 aaKnown RBP0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 GRIN2AQ12879 1464 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 COL4A5P29400 1685 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 CASP8AP2Q9UKL3 1982 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 CR1P17927 2039 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 NCOA6Q14686 2063 aaPredicted RBP0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 SPTBP11277 2137 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 ESPL1Q14674 2120 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 MED12Q93074 2177 aa0.52□□□□□ -2.33
TRAJ3-201ENST00000390534 TRAV23DV6A0A075B6W5 121 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 A0A0J9YY99 117 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 KRTAP9-6A8MVA2 160 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 MCRIP1C9JLW8 97 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 JMJD7-PLA2G4BH0Y9G9 81 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 GEMIN2O14893 280 aaKnown RBP0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 INE1O15225 51 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 PHLPP1O60346 1717 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 NDUFB6O95139 128 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 PPYP01298 95 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 COL5A1P20908 1838 aaPredicted RBP0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 GNG4P50150 75 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 PPP3R1P63098 170 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 BTG2P78543 158 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 RBM3P98179 157 aaKnown RBP0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 NAIPQ13075 1403 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 CATR1Q13166 79 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 KIAA0100Q14667 2235 aaKnown RBP0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 MYLKQ15746 1914 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 KRTAP6-3Q3LI67 103 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 Q56UQ5 140 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 MRPL54Q6P161 138 aaKnown RBP0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 SPAG17Q6Q759 2223 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 UNQ5815/PRO19632Q6UWF5 114 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 PLPP5Q8NEB5 264 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 C10orf105Q8TEF2 133 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM141Q96I45 108 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 ALPK3Q96L96 1907 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM106BQ9NUM4 274 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 MBD5Q9P267 1494 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 SNURFQ9Y675 71 aa0.51□□□□□ -2.33
TRAJ3-201ENST00000390534 ABCA4P78363 2273 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 ZGRF1Q86YA3 2104 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 LAMB2P55268 1798 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 CASZ1Q86V15 1759 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 KIDINS220Q9ULH0 1771 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 COL5A3P25940 1745 aaPredicted RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 VWDEQ8N2E2 1590 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 UHRF1BP1LA0JNW5 1464 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 CECR2Q9BXF3 1484 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 ERBINQ96RT1 1412 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKV3-7A0A075B6H7 116 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 LOC110117498A0A087WWA1 95 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 TRAV2A0A0B4J234 112 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms