RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 C11orf1Q9H5F2 150 aa16.43■□□□□ 0.22
SKI-201ENST00000378536 HIST2H2BCQ6DN03 193 aa16.43■□□□□ 0.22
SKI-201ENST00000378536 CFHR4Q92496 578 aa16.43■□□□□ 0.22
SKI-201ENST00000378536 ARHGAP21Q5T5U3 1957 aa16.43■□□□□ 0.22
SKI-201ENST00000378536 SYS1-DBNDD2H3BUS1 97 aa16.42■□□□□ 0.22
SKI-201ENST00000378536 I3L3M4 83 aa16.42■□□□□ 0.22
SKI-201ENST00000378536 Q6YL49 198 aa16.42■□□□□ 0.22
SKI-201ENST00000378536 Q8N8P6 123 aa16.42■□□□□ 0.22
SKI-201ENST00000378536 CD5LO43866 347 aa16.42■□□□□ 0.22
SKI-201ENST00000378536 FAM167A-AS1Q96KT0 104 aa16.42■□□□□ 0.22
SKI-201ENST00000378536 CHD3Q12873 2000 aaKnown RBP16.42■□□□□ 0.22
SKI-201ENST00000378536 TRAV26-2A0A0B4J265 109 aa16.41■□□□□ 0.22
SKI-201ENST00000378536 EIF4EBP1Q13541 118 aaPredicted RBP16.41■□□□□ 0.22
SKI-201ENST00000378536 PYGO2Q9BRQ0 406 aa16.41■□□□□ 0.22
SKI-201ENST00000378536 EGR2P11161 476 aaPredicted RBP16.41■□□□□ 0.22
SKI-201ENST00000378536 PLA2G2EQ9NZK7 142 aa16.41■□□□□ 0.22
SKI-201ENST00000378536 MYCNOSP40205 109 aa16.41■□□□□ 0.22
SKI-201ENST00000378536 CKS1BP61024 79 aa16.41■□□□□ 0.22
SKI-201ENST00000378536 SLAQ13239 276 aa16.41■□□□□ 0.22
SKI-201ENST00000378536 RBMY1BA6NDE4 496 aaKnown RBP16.4■□□□□ 0.22
SKI-201ENST00000378536 RBMY1EA6NEQ0 496 aaKnown RBP16.4■□□□□ 0.22
SKI-201ENST00000378536 RBMY1DP0C7P1 496 aaKnown RBP16.4■□□□□ 0.22
SKI-201ENST00000378536 RBMY1A1P0DJD3 496 aaKnown RBP16.4■□□□□ 0.22
SKI-201ENST00000378536 RBMY1CP0DJD4 496 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 M0R2P5 195 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 MORN3Q6PF18 240 aaPredicted RBP16.4■□□□□ 0.22
SKI-201ENST00000378536 PLEKHB2Q96CS7 222 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 TRAV2A0A0B4J234 112 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 SDHAF1A6NFY7 115 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 DSCAMO60469 2012 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 TRAV13-1A0A0B4J241 112 aa16.4■□□□□ 0.22
SKI-201ENST00000378536 TRBV7-9A0A0J9YWB2 115 aa16.39■□□□□ 0.22
SKI-201ENST00000378536 LY6LH3BQJ8 138 aa16.39■□□□□ 0.22
SKI-201ENST00000378536 GNRH2O43555 120 aa16.39■□□□□ 0.22
SKI-201ENST00000378536 RASL10AQ92737 203 aa16.39■□□□□ 0.22
SKI-201ENST00000378536 SRSF2Q01130 221 aaKnown RBP16.39■□□□□ 0.21
SKI-201ENST00000378536 TP53TG1Q9Y2A0 90 aa16.39■□□□□ 0.21
SKI-201ENST00000378536 PIEZO2Q9H5I5 2752 aa16.39■□□□□ 0.21
SKI-201ENST00000378536 TRBV25-1A0A075B6N4 114 aa16.39■□□□□ 0.21
SKI-201ENST00000378536 ZNRF2Q8NHG8 242 aa16.39■□□□□ 0.21
SKI-201ENST00000378536 CITED2Q99967 270 aaPredicted RBP16.39■□□□□ 0.21
SKI-201ENST00000378536 ARFGEF3Q5TH69 2177 aa16.38■□□□□ 0.21
SKI-201ENST00000378536 LINC01548A6NM66 108 aa16.38■□□□□ 0.21
SKI-201ENST00000378536 SS18Q15532 418 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 PLA2G2AP14555 144 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 C2orf66Q6UXQ4 117 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 TRBV12-3P01733 135 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 C11orf68Q9H3H3 251 aaKnown RBP16.37■□□□□ 0.21
SKI-201ENST00000378536 A0A0U1RRA0 63 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 LINC00158P58513 81 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 HIVEP2P31629 2446 aa16.37■□□□□ 0.21
SKI-201ENST00000378536 IGF1P05019 195 aa16.36■□□□□ 0.21
SKI-201ENST00000378536 EBI3Q14213 229 aa16.36■□□□□ 0.21
SKI-201ENST00000378536 IGHG4P01861 327 aa16.36■□□□□ 0.21
SKI-201ENST00000378536 WIPF2Q8TF74 440 aaPredicted RBP16.36■□□□□ 0.21
SKI-201ENST00000378536 NDUFAF3Q9BU61 184 aa16.36■□□□□ 0.21
SKI-201ENST00000378536 TRAV25A0A0B4J276 109 aa16.35■□□□□ 0.21
SKI-201ENST00000378536 RNF152Q8N8N0 203 aa16.35■□□□□ 0.21
SKI-201ENST00000378536 EML5Q05BV3 1969 aa16.35■□□□□ 0.21
SKI-201ENST00000378536 NOTCH3Q9UM47 2321 aa16.35■□□□□ 0.21
SKI-201ENST00000378536 UNQ9165/PRO28630Q6UXU0 137 aa16.35■□□□□ 0.21
SKI-201ENST00000378536 TMEM141Q96I45 108 aa16.35■□□□□ 0.21
SKI-201ENST00000378536 NOP10Q9NPE3 64 aaKnown RBP16.35■□□□□ 0.21
SKI-201ENST00000378536 NHP2Q9NX24 153 aaKnown RBP16.35■□□□□ 0.21
SKI-201ENST00000378536 hDV102S1A0JD36 115 aa16.34■□□□□ 0.21
SKI-201ENST00000378536 CCDC140Q96MF4 163 aa16.34■□□□□ 0.21
SKI-201ENST00000378536 TMEM238C9JI98 176 aa16.34■□□□□ 0.21
SKI-201ENST00000378536 CRYGBP07316 175 aa16.34■□□□□ 0.21
SKI-201ENST00000378536 ZMAT4Q9H898 229 aa16.34■□□□□ 0.21
SKI-201ENST00000378536 WDR87Q6ZQQ6 2873 aa16.33■□□□□ 0.21
SKI-201ENST00000378536 IGKV1D-37A0A075B6S9 117 aa16.33■□□□□ 0.21
SKI-201ENST00000378536 K7ERU9 68 aa16.33■□□□□ 0.21
SKI-201ENST00000378536 LINC00587B1AMM8 73 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 U3KQE9 123 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 ZC2HC1BQ5TFG8 222 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 PTPN13Q12923 2485 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 IGHV3-38A0A0C4DH36 116 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 PSCAO43653 123 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 NPYP01303 97 aa16.33■□□□□ 0.2
SKI-201ENST00000378536 DMRTA1Q5VZB9 504 aa16.32■□□□□ 0.2
SKI-201ENST00000378536 C6orf226Q5I0X4 101 aa16.32■□□□□ 0.2
SKI-201ENST00000378536 IGF2BP2-AS1Q96M15 143 aa16.32■□□□□ 0.2
SKI-201ENST00000378536 TIMM21Q9BVV7 248 aa16.32■□□□□ 0.2
SKI-201ENST00000378536 SMIM2Q9BVW6 85 aa16.32■□□□□ 0.2
SKI-201ENST00000378536 A0A087X0K7 114 aa16.31■□□□□ 0.2
SKI-201ENST00000378536 HSD52Q0P140 79 aa16.31■□□□□ 0.2
SKI-201ENST00000378536 TMEM243Q9BU79 118 aa16.31■□□□□ 0.2
SKI-201ENST00000378536 PRAC2D3DTV9 90 aa16.31■□□□□ 0.2
SKI-201ENST00000378536 SIGLEC8Q9NYZ4 499 aa16.31■□□□□ 0.2
SKI-201ENST00000378536 IGLC2P0DOY2 106 aa16.31■□□□□ 0.2
SKI-201ENST00000378536 ORAOV1Q8WV07 137 aa16.3■□□□□ 0.2
SKI-201ENST00000378536 C20orf78Q9BR46 151 aa16.3■□□□□ 0.2
SKI-201ENST00000378536 ATRXP46100 2492 aa16.3■□□□□ 0.2
SKI-201ENST00000378536 C9orf47Q6ZRZ4 202 aa16.3■□□□□ 0.2
SKI-201ENST00000378536 NEGR1Q7Z3B1 354 aa16.3■□□□□ 0.2
SKI-201ENST00000378536 MRAPQ8TCY5 172 aa16.29■□□□□ 0.2
SKI-201ENST00000378536 INAFM1C9JVW0 142 aa16.29■□□□□ 0.2
SKI-201ENST00000378536 PYY3Q5JQD4 70 aa16.29■□□□□ 0.2
SKI-201ENST00000378536 CSPG4Q6UVK1 2322 aa16.29■□□□□ 0.2
SKI-201ENST00000378536 PAX4O43316 350 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms