RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RITA1Q96K30 269 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 MRPL27Q9P0M9 148 aaKnown RBP12.87□□□□□ -0.35
RGP1-201ENST00000378078 BAALC-AS2P0C853 105 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 WISP1O95388 367 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 VOPP1Q96AW1 172 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 ABCA4P78363 2273 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 H3BMG7 143 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 LOXP28300 417 aaPredicted RBP12.87□□□□□ -0.35
RGP1-201ENST00000378078 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 FRMPD3Q5JV73 1810 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 SPTBN1Q01082 2364 aaKnown RBP12.86□□□□□ -0.35
RGP1-201ENST00000378078 NDUFS6O75380 124 aaKnown RBP12.86□□□□□ -0.35
RGP1-201ENST00000378078 ZNF664Q8N3J9 261 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 IGKV1-6A0A0C4DH72 117 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 HIST2H2BCQ6DN03 193 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 PRR25Q96S07 402 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 MGAMO43451 1857 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 SRSF2Q01130 221 aaKnown RBP12.86□□□□□ -0.35
RGP1-201ENST00000378078 LINC01559Q495D7 138 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 RLFQ13129 1914 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 CTSGP08311 255 aa12.86□□□□□ -0.35
RGP1-201ENST00000378078 ACYP1P07311 99 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 BLCAPP62952 87 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 UBE2V1Q13404 147 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 PDE6HQ13956 83 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 DOPEY2Q9Y3R5 2298 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 GFRA4Q9GZZ7 299 aa12.85□□□□□ -0.35
RGP1-201ENST00000378078 POLR3KQ9Y2Y1 108 aaPredicted RBP12.85□□□□□ -0.35
RGP1-201ENST00000378078 K7EQD1 137 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 KIF26AQ9ULI4 1882 aaPredicted RBP12.84□□□□□ -0.35
RGP1-201ENST00000378078 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.355e-6■■■■□ 23.8
RGP1-201ENST00000378078 IGHV4-61A0A0C4DH41 118 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 ANKRD29Q8N6D5 301 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 J3QQQ9 107 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 IGKV4-1P06312 121 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 ANKRD39Q53RE8 183 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
RGP1-201ENST00000378078 TRIOBPQ9H2D6 2365 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 COX7A2LO14548 114 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 DEFB1P60022 68 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
RGP1-201ENST00000378078 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.35
RGP1-201ENST00000378078 M0R2N4 97 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 IGHV2-5P01817 119 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 TRBV20-1A0A075B6N2 111 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 DLEU1O43261 78 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 FAM110AQ9BQ89 295 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 HHLA3Q9XRX5 114 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 CEP290O15078 2479 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 MRPL36Q9P0J6 103 aaKnown RBP12.83□□□□□ -0.36
RGP1-201ENST00000378078 SIPA1L1O43166 1804 aa12.83□□□□□ -0.36
RGP1-201ENST00000378078 YPEL3P61236 119 aaPredicted RBP12.82□□□□□ -0.36
RGP1-201ENST00000378078 HRCT1Q6UXD1 115 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 C18orf32Q8TCD1 76 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 VWA8A3KMH1 1905 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 A0A0J9YWU9 116 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 WT1-ASQ06250 92 aa12.82□□□□□ -0.36
RGP1-201ENST00000378078 TRBV24-1A0A075B6N3 115 aa12.81□□□□□ -0.36
RGP1-201ENST00000378078 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
RGP1-201ENST00000378078 SEC61GP60059 68 aa12.81□□□□□ -0.36
RGP1-201ENST00000378078 NDUFB1O75438 58 aa12.81□□□□□ -0.36
RGP1-201ENST00000378078 CSRP3P50461 194 aa12.81□□□□□ -0.36
RGP1-201ENST00000378078 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
RGP1-201ENST00000378078 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
RGP1-201ENST00000378078 ETV2O00321 342 aaPredicted RBP12.8□□□□□ -0.36
RGP1-201ENST00000378078 QRFPP83859 136 aa12.8□□□□□ -0.36
RGP1-201ENST00000378078 VSIG2Q96IQ7 327 aa12.8□□□□□ -0.36
RGP1-201ENST00000378078 MRPL23Q16540 153 aaKnown RBP12.8□□□□□ -0.36
RGP1-201ENST00000378078 UTF1Q5T230 341 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 PLXNA3P51805 1871 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 C9orf118A6NHY6 69 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 TMEM258P61165 79 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 FAM231DQ6ZW35 169 aa12.79□□□□□ -0.36
RGP1-201ENST00000378078 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.78□□□□□ -0.36
RGP1-201ENST00000378078 PRR20EP86478 221 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 PRR20CP86479 221 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 PRR20DP86480 221 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 PRR20BP86481 221 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 PRR20AP86496 221 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 ATP5G1P05496 136 aa12.78□□□□□ -0.36
RGP1-201ENST00000378078 NTN5Q8WTR8 489 aaPredicted RBP12.78□□□□□ -0.36
RGP1-201ENST00000378078 PYY3Q5JQD4 70 aa12.77□□□□□ -0.36
RGP1-201ENST00000378078 DEFB125Q8N687 156 aa12.77□□□□□ -0.36
RGP1-201ENST00000378078 AJUBAQ96IF1 538 aa12.77□□□□□ -0.36
RGP1-201ENST00000378078 LTBP1Q14766 1721 aa12.77□□□□□ -0.37
RGP1-201ENST00000378078 OR11H6Q8NGC7 330 aa12.77□□□□□ -0.37
RGP1-201ENST00000378078 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms