RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TVP23CQ96ET8 276 aa14.38□□□□□ -0.11
VSX1-201ENST00000376707 SERTM2A0A1B0GWG4 89 aa14.37□□□□□ -0.11
VSX1-201ENST00000376707 RNF222A6NCQ9 220 aa14.37□□□□□ -0.11
VSX1-201ENST00000376707 SRIP30626 198 aa14.37□□□□□ -0.11
VSX1-201ENST00000376707 GNG5P63218 68 aa14.37□□□□□ -0.11
VSX1-201ENST00000376707 IQCF2Q8IXL9 164 aa14.37□□□□□ -0.11
VSX1-201ENST00000376707 INO80EQ8NBZ0 244 aaPredicted RBP14.37□□□□□ -0.11
VSX1-201ENST00000376707 TNFSF18Q9UNG2 199 aa14.37□□□□□ -0.11
VSX1-201ENST00000376707 TRAV21A0A0B4J279 112 aa14.36□□□□□ -0.11
VSX1-201ENST00000376707 GCHFRP30047 84 aa14.36□□□□□ -0.11
VSX1-201ENST00000376707 C5orf17Q8NAS9 161 aa14.36□□□□□ -0.11
VSX1-201ENST00000376707 SH3BGRL3Q9H299 93 aa14.36□□□□□ -0.11
VSX1-201ENST00000376707 TREM1Q9NP99 234 aa14.36□□□□□ -0.11
VSX1-201ENST00000376707 TRAV9-2A0A087WT02 112 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 K7EQD1 137 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 EREGO14944 169 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 ORM1P02763 201 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 GYPEP15421 78 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 Q8N1X5 172 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 LY96Q9Y6Y9 160 aa14.35□□□□□ -0.11
VSX1-201ENST00000376707 IGHV3-16A0A0C4DH30 117 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 CXorf1O96002 111 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 TCRAP04437 139 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 ERVFC1-1P60608 527 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 NFE4Q86UQ8 179 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 ACTR3CQ9C0K3 210 aaPredicted RBP14.34□□□□□ -0.11
VSX1-201ENST00000376707 TMEM167BQ9NRX6 74 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
VSX1-201ENST00000376707 TRAV4A0A0B4J268 109 aa14.33□□□□□ -0.12
VSX1-201ENST00000376707 F6UZH7 168 aa14.33□□□□□ -0.12
VSX1-201ENST00000376707 GNRH2O43555 120 aa14.33□□□□□ -0.12
VSX1-201ENST00000376707 RPL7L1Q6DKI1 246 aaKnown RBP14.33□□□□□ -0.12
VSX1-201ENST00000376707 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
VSX1-201ENST00000376707 OR2T35Q8NGX2 323 aa14.33□□□□□ -0.12
VSX1-201ENST00000376707 SCRT2Q9NQ03 307 aa14.33□□□□□ -0.12
VSX1-201ENST00000376707 DNAH5Q8TE73 4624 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 FXYD6-FXYD2A0A087WZ82 144 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 C9JCJ5 164 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 M0R2P5 195 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 KCNS1Q96KK3 526 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 TXNDC17Q9BRA2 123 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 NDFIP1Q9BT67 221 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 SDF2L1Q9HCN8 221 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 PGPEP1Q9NXJ5 209 aa14.32□□□□□ -0.12
VSX1-201ENST00000376707 BORCS7-ASMTA0A0B4J1R7 106 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 GGTLC3B5MD39 225 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 G3V3Q6 166 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 K7EQM0 130 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 IGLV2-11P01706 119 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 TYMSP04818 313 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 RGS21Q2M5E4 152 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 WFDC10BQ8IUB3 73 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 SGK494Q96LW2 274 aa14.31□□□□□ -0.12
VSX1-201ENST00000376707 EVI2AP22794 236 aa14.3□□□□□ -0.12
VSX1-201ENST00000376707 SUMO1P63165 101 aaKnown RBP14.3□□□□□ -0.12
VSX1-201ENST00000376707 EPDR1Q9UM22 224 aa14.3□□□□□ -0.12
VSX1-201ENST00000376707 APOBP04114 4563 aaKnown RBP14.29□□□□□ -0.12
VSX1-201ENST00000376707 A0A1W2PRE2 83 aa14.29□□□□□ -0.12
VSX1-201ENST00000376707 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
VSX1-201ENST00000376707 K7EP13 123 aa14.29□□□□□ -0.12
VSX1-201ENST00000376707 CYB561D1Q8N8Q1 229 aa14.29□□□□□ -0.12
VSX1-201ENST00000376707 MSRB1Q9NZV6 116 aa14.29□□□□□ -0.12
VSX1-201ENST00000376707 PSG8Q9UQ74 426 aa14.29□□□□□ -0.12
VSX1-201ENST00000376707 ZNF80P51504 273 aaPredicted RBP14.28□□□□□ -0.12
VSX1-201ENST00000376707 FLI1Q01543 452 aaPredicted RBP14.28□□□□□ -0.12
VSX1-201ENST00000376707 ZNF726P1Q15940 193 aa14.28□□□□□ -0.12
VSX1-201ENST00000376707 TMEM75Q8N9X5 138 aa14.28□□□□□ -0.12
VSX1-201ENST00000376707 CTXND1A0A1B0GTU2 59 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 TAAR5O14804 337 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 DNAH10OSP0CZ25 163 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 FUSP35637 526 aaKnown RBP eCLIP14.27□□□□□ -0.13
VSX1-201ENST00000376707 CDPF1Q6NVV7 123 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 SH2D6Q7Z4S9 175 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 NHLRC2Q8NBF2 726 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 C11orf21Q9P2W6 132 aa14.27□□□□□ -0.13
VSX1-201ENST00000376707 LOC100131303A0A0U1RQF7 123 aa14.26□□□□□ -0.13
VSX1-201ENST00000376707 GCGP01275 180 aa14.26□□□□□ -0.13
VSX1-201ENST00000376707 PFN1P07737 140 aaKnown RBP14.26□□□□□ -0.13
VSX1-201ENST00000376707 A0A087WTM6 91 aa14.25□□□□□ -0.13
VSX1-201ENST00000376707 GATA1P15976 413 aaPredicted RBP14.25□□□□□ -0.13
VSX1-201ENST00000376707 SMUG1Q53HV7 270 aa14.25□□□□□ -0.13
VSX1-201ENST00000376707 SAPCD1Q5SSQ6 148 aa14.25□□□□□ -0.13
VSX1-201ENST00000376707 PRNTQ86SH4 94 aa14.25□□□□□ -0.13
VSX1-201ENST00000376707 CRYGDP07320 174 aa14.24□□□□□ -0.13
VSX1-201ENST00000376707 PPT1P50897 306 aa14.24□□□□□ -0.13
VSX1-201ENST00000376707 ZNF876PQ49A33 203 aa14.24□□□□□ -0.13
VSX1-201ENST00000376707 ZFP69Q49AA0 526 aa14.24□□□□□ -0.13
VSX1-201ENST00000376707 C10orf126Q8N4M7 172 aa14.24□□□□□ -0.13
VSX1-201ENST00000376707 CYTL1Q9NRR1 136 aa14.24□□□□□ -0.13
VSX1-201ENST00000376707 ARPC5O15511 151 aa14.23□□□□□ -0.13
VSX1-201ENST00000376707 AKR1C8PQ5T2L2 129 aa14.23□□□□□ -0.13
VSX1-201ENST00000376707 C9orf85Q96MD7 179 aa14.23□□□□□ -0.13
VSX1-201ENST00000376707 NKX6-2Q9C056 277 aaPredicted RBP14.23□□□□□ -0.13
VSX1-201ENST00000376707 TIRAPP58753 221 aa14.22□□□□□ -0.13
VSX1-201ENST00000376707 PTH2Q96A98 100 aa14.22□□□□□ -0.13
VSX1-201ENST00000376707 LINC00479Q96M42 142 aa14.22□□□□□ -0.13
VSX1-201ENST00000376707 IGHV3-38A0A0C4DH36 116 aa14.21□□□□□ -0.13
VSX1-201ENST00000376707 CIDEAO60543 219 aa14.21□□□□□ -0.13
VSX1-201ENST00000376707 SLC25A29Q8N8R3 303 aa14.21□□□□□ -0.13
VSX1-201ENST00000376707 PRADC1Q9BSG0 188 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms