RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 HIGD1BQ9P298 99 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 LENEPQ9Y5L5 61 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 LY6DQ14210 128 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.64
MSH5-201ENST00000375703 IGF2RP11717 2491 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 GCSHP23434 173 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 RIPPLY3P57055 190 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 UNQ9165/PRO28630Q6UXU0 137 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
MSH5-201ENST00000375703 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
MSH5-201ENST00000375703 K7EP34 96 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 SPTBN1Q01082 2364 aaKnown RBP11.07□□□□□ -0.64
MSH5-201ENST00000375703 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 IGHV1-69DA0A0B4J2H0 117 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 IGHV1-69P01742 117 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 CRIP2P52943 208 aaPredicted RBP11.07□□□□□ -0.64
MSH5-201ENST00000375703 CHAC1Q9BUX1 264 aa11.07□□□□□ -0.64
MSH5-201ENST00000375703 K7ERU9 68 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 A0A087WX48 190 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 A0A1W2PPM0 123 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 C19orf84I3L1E1 186 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 M0R381 172 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 NDUFA4O00483 81 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 OVOL1O14753 267 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 SPRY2O43597 315 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 S100A4P26447 101 aaKnown RBP11.06□□□□□ -0.64
MSH5-201ENST00000375703 GPHB5Q86YW7 130 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 ZFAND2AQ8N6M9 145 aa11.06□□□□□ -0.64
MSH5-201ENST00000375703 IGHV4-39P01824 125 aa11.05□□□□□ -0.64
MSH5-201ENST00000375703 FXYD2P54710 66 aa11.05□□□□□ -0.64
MSH5-201ENST00000375703 RPL11P62913 178 aaKnown RBP11.05□□□□□ -0.64
MSH5-201ENST00000375703 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
MSH5-201ENST00000375703 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
MSH5-201ENST00000375703 DEFB1P60022 68 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 LY6EQ16553 131 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 MEGF9Q9H1U4 602 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 IGHV3-11P01762 117 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 SAMD5Q5TGI4 173 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 SPCS1Q9Y6A9 102 aa11.04□□□□□ -0.64
MSH5-201ENST00000375703 FABP2P12104 132 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 ASIPP42127 132 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 MAPKAPK5-AS1Q8N8E1 139 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 SOCS3O14543 225 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 HLA-DRB4P13762 266 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 RNASE4P34096 147 aaKnown RBP11.03□□□□□ -0.64
MSH5-201ENST00000375703 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 C14orf178Q8N769 122 aaPredicted RBP11.03□□□□□ -0.64
MSH5-201ENST00000375703 USMG5Q96IX5 58 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 HLA-DRB4X5D2U9 266 aa11.03□□□□□ -0.64
MSH5-201ENST00000375703 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 PLNP26678 52 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 SUMO2P61956 95 aaKnown RBP11.02□□□□□ -0.64
MSH5-201ENST00000375703 ORMDL2Q53FV1 153 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 CEND1Q8N111 149 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 RASL10AQ92737 203 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 KLK15Q9H2R5 256 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 DPH3P1Q9H4G8 78 aa11.02□□□□□ -0.64
MSH5-201ENST00000375703 H7C1H1 209 aa11.02□□□□□ -0.65
MSH5-201ENST00000375703 SAP30O75446 220 aa11.02□□□□□ -0.65
MSH5-201ENST00000375703 OR5A1Q8NGJ0 315 aa11.02□□□□□ -0.65
MSH5-201ENST00000375703 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
MSH5-201ENST00000375703 F6UB75 175 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 C20orf78Q9BR46 151 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 TM2D2Q9BX73 214 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 GNRH2O43555 120 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 IGHG2P01859 326 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 IGHV4-38-2P0DP08 117 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 PF4V1P10720 104 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 WFDC12Q8WWY7 111 aa11.01□□□□□ -0.65
MSH5-201ENST00000375703 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
MSH5-201ENST00000375703 AKAP6Q13023 2319 aa11□□□□□ -0.65
MSH5-201ENST00000375703 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
MSH5-201ENST00000375703 TOMM6Q96B49 74 aa11□□□□□ -0.65
MSH5-201ENST00000375703 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
MSH5-201ENST00000375703 HIVEP3Q5T1R4 2406 aa11□□□□□ -0.65
MSH5-201ENST00000375703 F8VRH5 84 aa11□□□□□ -0.65
MSH5-201ENST00000375703 MGPP08493 103 aa11□□□□□ -0.65
MSH5-201ENST00000375703 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
MSH5-201ENST00000375703 H3BUA1 57 aa11□□□□□ -0.65
MSH5-201ENST00000375703 H3BUX3 64 aa11□□□□□ -0.65
MSH5-201ENST00000375703 K7ERJ3 54 aa11□□□□□ -0.65
MSH5-201ENST00000375703 GNLYP22749 145 aa11□□□□□ -0.65
MSH5-201ENST00000375703 BLCAPP62952 87 aa11□□□□□ -0.65
MSH5-201ENST00000375703 FAM19A4Q96LR4 140 aa11□□□□□ -0.65
MSH5-201ENST00000375703 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
MSH5-201ENST00000375703 BRI3O95415 125 aa10.99□□□□□ -0.65
MSH5-201ENST00000375703 LCNL1Q6ZST4 164 aa10.99□□□□□ -0.65
MSH5-201ENST00000375703 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
MSH5-201ENST00000375703 A6NDX4 124 aa10.98□□□□□ -0.65
MSH5-201ENST00000375703 K7EMI3 77 aa10.98□□□□□ -0.65
MSH5-201ENST00000375703 MED14OSP0DP75 135 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms