RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 LINC01548A6NM66 108 aa13.7□□□□□ -0.22
PHF1-201ENST00000374512 C19orf54Q5BKX5 351 aa13.7□□□□□ -0.22
PHF1-201ENST00000374512 GTSCR1Q86UQ5 136 aa13.7□□□□□ -0.22
PHF1-201ENST00000374512 MRPL35Q9NZE8 188 aaKnown RBP13.7□□□□□ -0.22
PHF1-201ENST00000374512 TRAV41A0A0B4J266 112 aa13.69□□□□□ -0.22
PHF1-201ENST00000374512 SLC25A16P16260 332 aa13.69□□□□□ -0.22
PHF1-201ENST00000374512 ORMDL2Q53FV1 153 aa13.69□□□□□ -0.22
PHF1-201ENST00000374512 TMEM160Q9NX00 188 aa13.69□□□□□ -0.22
PHF1-201ENST00000374512 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
PHF1-201ENST00000374512 TRAV40A0A0B4J280 105 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.68□□□□□ -0.22
PHF1-201ENST00000374512 OVOL1O14753 267 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 CEND1Q8N111 149 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 C20orf78Q9BR46 151 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 SMIM2Q9BVW6 85 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 G3V4G9 280 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 FXYD2P54710 66 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 MEGF9Q9H1U4 602 aa13.68□□□□□ -0.22
PHF1-201ENST00000374512 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
PHF1-201ENST00000374512 BRI3O95415 125 aa13.67□□□□□ -0.22
PHF1-201ENST00000374512 MED14OSP0DP75 135 aa13.67□□□□□ -0.22
PHF1-201ENST00000374512 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
PHF1-201ENST00000374512 IGHV3-49A0A0A0MS15 119 aa13.67□□□□□ -0.22
PHF1-201ENST00000374512 TRAV21A0A0B4J279 112 aa13.67□□□□□ -0.22
PHF1-201ENST00000374512 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
PHF1-201ENST00000374512 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 H3BVH4 76 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 H7C1H1 209 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 OR10J6PQ8NGY7 276 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 PHLDA1Q8WV24 401 aaPredicted RBP13.66□□□□□ -0.22
PHF1-201ENST00000374512 NAA38Q9BRA0 125 aaKnown RBP13.66□□□□□ -0.22
PHF1-201ENST00000374512 TRBV7-9A0A0J9YWB2 115 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 LINC01619G3V211 115 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 NDUFA4O00483 81 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 ARL3P36405 182 aa13.66□□□□□ -0.22
PHF1-201ENST00000374512 F8VRH5 84 aa13.65□□□□□ -0.22
PHF1-201ENST00000374512 PPP1R17O96001 155 aa13.65□□□□□ -0.22
PHF1-201ENST00000374512 M0R381 172 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 SAP30O75446 220 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 IGHV4-39P01824 125 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 TM4SF20Q53R12 229 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 TOMM6Q96B49 74 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 DPH3P1Q9H4G8 78 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 H3BUA1 57 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 SUMO2P61956 95 aaKnown RBP13.64□□□□□ -0.23
PHF1-201ENST00000374512 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 ZFAND2AQ8N6M9 145 aa13.64□□□□□ -0.23
PHF1-201ENST00000374512 ASIPP42127 132 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 PRR9Q5T870 116 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 C20orf173Q96LM9 149 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 CACNA1BQ00975 2339 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 AKAP6Q13023 2319 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 IGF1P05019 195 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
PHF1-201ENST00000374512 PKD1L2Q7Z442 2459 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 SOCS3O14543 225 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 APRG1Q8IVJ8 170 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 IGHV1-69DA0A0B4J2H0 117 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 IGHV1-69P01742 117 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 S100A4P26447 101 aaKnown RBP13.62□□□□□ -0.23
PHF1-201ENST00000374512 FAM19A4Q96LR4 140 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 SCGB3A1Q96QR1 104 aa13.62□□□□□ -0.23
PHF1-201ENST00000374512 NHP2Q9NX24 153 aaKnown RBP13.62□□□□□ -0.23
PHF1-201ENST00000374512 E9PLD3 99 aa13.61□□□□□ -0.23
PHF1-201ENST00000374512 Q6ZQT7 251 aa13.61□□□□□ -0.23
PHF1-201ENST00000374512 GPHB5Q86YW7 130 aa13.61□□□□□ -0.23
PHF1-201ENST00000374512 MAPKAPK5-AS1Q8N8E1 139 aa13.61□□□□□ -0.23
PHF1-201ENST00000374512 RASL10AQ92737 203 aa13.61□□□□□ -0.23
PHF1-201ENST00000374512 PHLDA3Q9Y5J5 127 aa13.61□□□□□ -0.23
PHF1-201ENST00000374512 IGHV3OR16-10A0A075B7F0 116 aa13.6□□□□□ -0.23
PHF1-201ENST00000374512 LINC01549A6NIU2 74 aa13.6□□□□□ -0.23
PHF1-201ENST00000374512 NEXN-AS1Q8NBZ9 246 aa13.6□□□□□ -0.23
PHF1-201ENST00000374512 PIMREGQ9BSJ6 248 aa13.6□□□□□ -0.23
PHF1-201ENST00000374512 CHTOPQ9Y3Y2 248 aaKnown RBP13.6□□□□□ -0.23
PHF1-201ENST00000374512 CACNA1AO00555 2505 aa13.6□□□□□ -0.23
PHF1-201ENST00000374512 OR11H12B2RN74 326 aa13.59□□□□□ -0.23
PHF1-201ENST00000374512 OR11H1Q8NG94 326 aa13.59□□□□□ -0.23
PHF1-201ENST00000374512 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
PHF1-201ENST00000374512 POM121L12Q8N7R1 296 aa13.59□□□□□ -0.23
PHF1-201ENST00000374512 IGLL5B9A064 214 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 UNQ9165/PRO28630Q6UXU0 137 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 BRD3OSQ6XYD6 125 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 HIST1H4GQ99525 98 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 SPOCK3Q9BQ16 436 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 LINC00527Q9UJ94 153 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 ASH1LQ9NR48 2969 aaKnown RBP13.58□□□□□ -0.24
PHF1-201ENST00000374512 ABCA2Q9BZC7 2435 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 MYMXA0A1B0GTQ4 84 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 F8W1H4 67 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 K7ERJ3 54 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 RPL32P62910 135 aaKnown RBP13.58□□□□□ -0.24
PHF1-201ENST00000374512 C12orf74Q32Q52 190 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
PHF1-201ENST00000374512 IGHV4-61A0A0C4DH41 118 aa13.57□□□□□ -0.24
PHF1-201ENST00000374512 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
PHF1-201ENST00000374512 A0A1B0GWB2 263 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 NXPH4O95158 308 aa13.56□□□□□ -0.24
PHF1-201ENST00000374512 C14orf178Q8N769 122 aaPredicted RBP13.56□□□□□ -0.24
PHF1-201ENST00000374512 CCL19Q99731 98 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms