RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 LGALS9BQ3B8N2 356 aa14.82□□□□□ -0.04
TMEM54-202ENST00000373463 NKX6-2Q9C056 277 aaPredicted RBP14.82□□□□□ -0.04
TMEM54-202ENST00000373463 TRGV11A0A075B6L2 103 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 TRGV2A0A075B6R0 118 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 A0A1B0GVG6 124 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 NUDT3O95989 172 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 DPPA3Q6W0C5 159 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 Q86TA4 180 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 AKAP14Q86UN6 197 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 ARL2-SNX15V9GYD0 113 aa14.81□□□□□ -0.04
TMEM54-202ENST00000373463 A0A0J9YY99 117 aa14.8□□□□□ -0.04
TMEM54-202ENST00000373463 FBLL1A6NHQ2 334 aaKnown RBP14.8□□□□□ -0.04
TMEM54-202ENST00000373463 PAGE4O60829 102 aa14.8□□□□□ -0.04
TMEM54-202ENST00000373463 HIST1H2BAQ96A08 127 aa14.8□□□□□ -0.04
TMEM54-202ENST00000373463 VSIG2Q96IQ7 327 aa14.8□□□□□ -0.04
TMEM54-202ENST00000373463 DNAH10Q8IVF4 4471 aa14.79□□□□□ -0.04
TMEM54-202ENST00000373463 PFN1P07737 140 aaKnown RBP14.79□□□□□ -0.04
TMEM54-202ENST00000373463 RNF212Q495C1 297 aa14.79□□□□□ -0.04
TMEM54-202ENST00000373463 SMUG1Q53HV7 270 aa14.79□□□□□ -0.04
TMEM54-202ENST00000373463 CST9LP1Q5W188 147 aa14.79□□□□□ -0.04
TMEM54-202ENST00000373463 IGHV3-53P01767 116 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 H2AFB1P0C5Y9 115 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 CCL20P78556 96 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 SAPCD1Q5SSQ6 148 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 UBE2DNLQ8IWF7 75 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 C9orf62Q8N4C0 152 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 RASL10AQ92737 203 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 SPXQ9BT56 116 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 SDF2L1Q9HCN8 221 aa14.78□□□□□ -0.04
TMEM54-202ENST00000373463 FRAS1Q86XX4 4008 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 H3BNG1 76 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 CRIP1P50238 77 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 PPT1P50897 306 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 FHL2Q14192 279 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 ZC2HC1AQ96GY0 325 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 KCNS1Q96KK3 526 aa14.76□□□□□ -0.05
TMEM54-202ENST00000373463 IGKV3D-20A0A0C4DH25 116 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 SFTA3P0C7M3 94 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 SULT1A2P50226 295 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 ZFP69Q49AA0 526 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 COX8CQ7Z4L0 72 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 ZNF479Q96JC4 524 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 LINC00588Q9Y4M8 146 aa14.75□□□□□ -0.05
TMEM54-202ENST00000373463 IGLV2-18A0A075B6J9 118 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 TRAV1-1A0A0B4J248 108 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 TRBV6-1A0A0K0K1D8 114 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 Q6ZR54 194 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 SLC51BQ86UW2 128 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 FMC1Q96HJ9 113 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 C9orf85Q96MD7 179 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 TCEAL7Q9BRU2 100 aa14.74□□□□□ -0.05
TMEM54-202ENST00000373463 SCO2A0A1W2PP80 73 aa14.73□□□□□ -0.05
TMEM54-202ENST00000373463 M0R2N4 97 aa14.73□□□□□ -0.05
TMEM54-202ENST00000373463 M0R2P5 195 aa14.73□□□□□ -0.05
TMEM54-202ENST00000373463 RNASE3P12724 160 aaKnown RBP14.73□□□□□ -0.05
TMEM54-202ENST00000373463 ZNF575Q86XF7 245 aa14.73□□□□□ -0.05
TMEM54-202ENST00000373463 ZNRF2Q8NHG8 242 aa14.73□□□□□ -0.05
TMEM54-202ENST00000373463 A0A096LPF7 62 aa14.72□□□□□ -0.05
TMEM54-202ENST00000373463 LTAP01374 205 aa14.72□□□□□ -0.05
TMEM54-202ENST00000373463 RAB5CP51148 216 aa14.72□□□□□ -0.05
TMEM54-202ENST00000373463 ZFP30Q9Y2G7 519 aa14.72□□□□□ -0.05
TMEM54-202ENST00000373463 AKR1C3P42330 323 aa14.71□□□□□ -0.05
TMEM54-202ENST00000373463 CRYBA4P53673 196 aa14.71□□□□□ -0.05
TMEM54-202ENST00000373463 ESRGQ1W209 222 aa14.71□□□□□ -0.05
TMEM54-202ENST00000373463 EIF5AL1Q6IS14 154 aaKnown RBP14.71□□□□□ -0.05
TMEM54-202ENST00000373463 FABP5P3A8MUU1 101 aa14.7□□□□□ -0.06
TMEM54-202ENST00000373463 FAM3BP58499 235 aaPredicted RBP14.7□□□□□ -0.06
TMEM54-202ENST00000373463 UBE2G1P62253 170 aa14.7□□□□□ -0.06
TMEM54-202ENST00000373463 PRO0255Q9UI72 69 aa14.7□□□□□ -0.06
TMEM54-202ENST00000373463 BIRC6Q9NR09 4857 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 TRAV4A0A0B4J268 109 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 SH2D1AO60880 128 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 CCL18P55774 89 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 NHLRC2Q8NBF2 726 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 GNG13Q9P2W3 67 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 HHLA3Q9XRX5 114 aa14.69□□□□□ -0.06
TMEM54-202ENST00000373463 PGPEP1LA6NFU8 196 aa14.68□□□□□ -0.06
TMEM54-202ENST00000373463 PAX4O43316 350 aa14.68□□□□□ -0.06
TMEM54-202ENST00000373463 ZNF674Q2M3X9 581 aa14.68□□□□□ -0.06
TMEM54-202ENST00000373463 DNAH2Q9P225 4427 aa14.68□□□□□ -0.06
TMEM54-202ENST00000373463 KRBOX1C9JBD0 128 aa14.67□□□□□ -0.06
TMEM54-202ENST00000373463 C9JCJ5 164 aa14.67□□□□□ -0.06
TMEM54-202ENST00000373463 RTL8CO15255 209 aa14.67□□□□□ -0.06
TMEM54-202ENST00000373463 NKX2-5P52952 324 aaPredicted RBP14.67□□□□□ -0.06
TMEM54-202ENST00000373463 MLST8Q9BVC4 326 aa14.67□□□□□ -0.06
TMEM54-202ENST00000373463 MANBALQ9NQG1 85 aa14.67□□□□□ -0.06
TMEM54-202ENST00000373463 TRGV4A0A0C4DH28 118 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 M0R036 132 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 ZNF876PQ49A33 203 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 ZNF506Q5JVG8 444 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 OR4C5Q8NGB2 326 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 C11orf52Q96A22 123 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 DERL1Q9BUN8 251 aa14.66□□□□□ -0.06
TMEM54-202ENST00000373463 ORM1P02763 201 aa14.65□□□□□ -0.06
TMEM54-202ENST00000373463 SLAQ13239 276 aa14.65□□□□□ -0.06
TMEM54-202ENST00000373463 DNLZQ5SXM8 178 aa14.65□□□□□ -0.06
TMEM54-202ENST00000373463 FAM162BQ5T6X4 162 aa14.65□□□□□ -0.06
TMEM54-202ENST00000373463 PTH2Q96A98 100 aa14.65□□□□□ -0.06
TMEM54-202ENST00000373463 BOLA1Q9Y3E2 137 aa14.65□□□□□ -0.06
TMEM54-202ENST00000373463 B4DEV8 164 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms