RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 SMPXQ9UHP9 88 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 IGHV3-11P01762 117 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 SMIM17P0DL12 118 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 ATP5J2P56134 94 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 BLCAPP62952 87 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 LAGE3Q14657 143 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 Q6ZS46 218 aa9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 PEF1Q9UBV8 284 aaKnown RBP9.5□□□□□ -0.89
TSPAN6-201ENST00000373020 CFAP46Q8IYW2 2715 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 SPTAN1Q13813 2472 aaKnown RBP9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 C7orf71A4D174 169 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 IGKCP01834 107 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 PF4V1P10720 104 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 HLA-DRB4P13762 266 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 ERASQ7Z444 233 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 OR4C5Q8NGB2 326 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 HLA-DRB4X5D2U9 266 aa9.49□□□□□ -0.89
TSPAN6-201ENST00000373020 A0A0G2JLM5 398 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 NMUP48645 174 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 FOXC2Q99958 501 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 SMIM2Q9BVW6 85 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 TRAV8-6A0A0B4J262 113 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 DPM2O94777 84 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 PRSS1P07477 247 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 ASIPP42127 132 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 DEFB1P60022 68 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 DAZ1Q9NQZ3 744 aaKnown RBP9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 DOPEY1Q5JWR5 2465 aa9.48□□□□□ -0.89
TSPAN6-201ENST00000373020 TCTAP57738 103 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 COL12A1Q99715 3063 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 A6NDN8 102 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 H3BRM9 83 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 K7EMT4 169 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 NXPH4O95158 308 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 AVPP01185 164 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 LCNL1Q6ZST4 164 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
TSPAN6-201ENST00000373020 J3KRW8 73 aa9.46□□□□□ -0.89
TSPAN6-201ENST00000373020 M0R381 172 aa9.46□□□□□ -0.89
TSPAN6-201ENST00000373020 SRSF1Q07955 248 aaKnown RBP eCLIP9.46□□□□□ -0.89
TSPAN6-201ENST00000373020 TM4SF20Q53R12 229 aa9.46□□□□□ -0.89
TSPAN6-201ENST00000373020 RASL10AQ92737 203 aa9.46□□□□□ -0.89
TSPAN6-201ENST00000373020 C20orf78Q9BR46 151 aa9.46□□□□□ -0.89
TSPAN6-201ENST00000373020 CACNA1AO00555 2505 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 B4DSR2 109 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 RNF223E7ERA6 249 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 F6UB75 175 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 SLC25A16P16260 332 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 POM121L12Q8N7R1 296 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 MYOZ3Q8TDC0 251 aa9.46□□□□□ -0.9
TSPAN6-201ENST00000373020 A0A087WX48 190 aa9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 TMEM8BA6NDV4 472 aa9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 KLLNB2CW77 178 aa9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 K7EMI3 77 aa9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 RNASE3P12724 160 aaKnown RBP9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 GATA3P23771 443 aa9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 SUMO2P61956 95 aaKnown RBP9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 SPOCK3Q9BQ16 436 aa9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
TSPAN6-201ENST00000373020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.45□□□□□ -0.96e-8■■■■□ 23.4
TSPAN6-201ENST00000373020 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 C9orf118A6NHY6 69 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 S100A4P26447 101 aaKnown RBP9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 PHLDA3Q9Y5J5 127 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 PSMB8P28062 276 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 RNASE4P34096 147 aaKnown RBP9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 RBX1P62877 108 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 PIEZO1Q92508 2521 aa9.44□□□□□ -0.9
TSPAN6-201ENST00000373020 DSCR9P59020 149 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 UFSP1Q6NVU6 142 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 JMJD8Q96S16 334 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 CELSR2Q9HCU4 2923 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 SPRY2O43597 315 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 EDN2P20800 178 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
TSPAN6-201ENST00000373020 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 GNRH2O43555 120 aa9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 PLNP26678 52 aa9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 TMEM95Q3KNT9 176 aa9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 CHAC1Q9BUX1 264 aa9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
TSPAN6-201ENST00000373020 USP9XQ93008 2570 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms