RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NOTCH3Q9UM47 2321 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 IGLV9-49A0A0B4J1Y8 123 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 SOCS3O14543 225 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 OVOL1O14753 267 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 PPP1R2P9O14990 202 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 FRMD6-AS1P0C7T7 363 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 SCGB1A1P11684 91 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 ZNF25P17030 456 aaPredicted RBP2.64□□□□□ -1.99
MCF2-202ENST00000370573 ADCYAP1P18509 176 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 G0S2P27469 103 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 S100A7P31151 101 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 GALR1P47211 349 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 GNG5P63218 68 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 MEF2BQ02080 365 aaPredicted RBP2.64□□□□□ -1.99
MCF2-202ENST00000370573 JOSD1Q15040 202 aaPredicted RBP2.64□□□□□ -1.99
MCF2-202ENST00000370573 DEFB114Q30KQ6 69 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 KRTAP21-3Q3LHN1 58 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 KCNIP4Q6PIL6 250 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 CBLN2Q8IUK8 224 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 CYB561D1Q8N8Q1 229 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 NRACQ8N912 160 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 SMIM12Q96EX1 92 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 GPR82Q96P67 336 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 SLC35B3Q9H1N7 401 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 Q9H3A6 140 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 OTORQ9NRC9 128 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 ARL2-SNX15V9GYD0 113 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 CMYA5Q8N3K9 4069 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 IGKV3-7A0A075B6H7 116 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 IZUMO1RA6ND01 250 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ZNF705FA8MVS1 300 aaPredicted RBP2.63□□□□□ -1.99
MCF2-202ENST00000370573 PRAC2D3DTV9 90 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 M0R3E3 92 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 SFTA3P0C7M3 94 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 PDE6HQ13956 83 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 FAM24BQ8N5W8 94 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 RNF182Q8N6D2 247 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 DCANP1Q8TF63 244 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 TMEM158Q8WZ71 300 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 LINC00479Q96M42 142 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 DERL1Q9BUN8 251 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 MS4A6AQ9H2W1 248 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ZNF331Q9NQX6 463 aaPredicted RBP2.63□□□□□ -1.99
MCF2-202ENST00000370573 EPDR1Q9UM22 224 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 RNF24Q9Y225 148 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ZFP30Q9Y2G7 519 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 A0A087WZ39 114 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 F6UZH7 168 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 TMEM250H0YL14 139 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ZNF253O75346 499 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 SLC25A5P05141 298 aaKnown RBP2.63□□□□□ -1.99
MCF2-202ENST00000370573 DEFB1P60022 68 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ERVFC1-1P60608 527 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 PSG9Q00887 426 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 PSG3Q16557 428 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 TMEM61Q8N0U2 210 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 LYPD1Q8N2G4 141 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ORAOV1Q8WV07 137 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 C11orf52Q96A22 123 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 TXNDC17Q9BRA2 123 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 NRN1Q9NPD7 142 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 SIGLEC8Q9NYZ4 499 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 ANK2Q01484 3957 aa2.63□□□□□ -1.99
MCF2-202ENST00000370573 TRBV20OR9-2A0A075B6H5 130 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 A0A087WWC5 75 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 K7EQG2 157 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 PEX7O00628 323 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 PDE6DO43924 150 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 IGLV2-11P01706 119 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 TCRAP04437 139 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 TFPI2P48307 235 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 SOHLH1Q5JUK2 328 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 LCN12Q6JVE5 192 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 C12orf54Q6X4T0 127 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 ZFP82Q8N141 532 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 MTURNQ8N3F0 131 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 C3orf56Q8N813 242 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 C5orf17Q8NAS9 161 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 RPUSD4Q96CM3 377 aaKnown RBP2.62□□□□□ -1.99
MCF2-202ENST00000370573 RPH3ALQ9UNE2 315 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 KLF12Q9Y4X4 402 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 IGLV5-37A0A075B6J1 123 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 IGKV2-40A0A087WW87 121 aaPredicted RBP2.62□□□□□ -1.99
MCF2-202ENST00000370573 TRAV8-1A0A0A6YYK1 113 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 ISLRO14498 428 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 IGKV2D-40P01614 121 aaPredicted RBP2.62□□□□□ -1.99
MCF2-202ENST00000370573 IGLV1-51P01701 117 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 IGLV2-8P01709 118 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 ERCC8Q13216 396 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 IQCJQ1A5X6 159 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 COL5A1-AS1Q5SY13 56 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 GOLT1AQ6ZVE7 132 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 WFDC9Q8NEX5 89 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 MPLKIPQ8TAP9 179 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 DYNLRB2Q8TF09 96 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 FAM218AQ96MZ4 157 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 VGLL1Q99990 258 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 SLC50A1Q9BRV3 221 aa2.62□□□□□ -1.99
MCF2-202ENST00000370573 PARLQ9H300 379 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms