RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SH2D7A6NKC9 451 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-204ENST00000369530 SRRM4A7MD48 611 aaKnown RBP5.34□□□□□ -1.55
CSDE1-204ENST00000369530 CCL3L1P16619 93 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-204ENST00000369530 HBBP68871 147 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 C17orf58Q2M2W7 97 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 RAB37Q96AX2 223 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 VPS13BQ7Z7G8 4022 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 APOHP02749 345 aaPredicted RBP5.34□□□□□ -1.56
CSDE1-204ENST00000369530 LINC01559Q495D7 138 aa5.34□□□□□ -1.56
CSDE1-204ENST00000369530 DYNAPQ8N1N2 210 aa5.34□□□□□ -1.56
CSDE1-204ENST00000369530 F8P00451 2351 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 B4DSR2 109 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 NCR2O95944 276 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 FOXA3P55318 350 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-204ENST00000369530 OR5AN1Q8NGI8 311 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 ZDHHC16Q969W1 377 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 HSD17B10Q99714 261 aaKnown RBP5.33□□□□□ -1.56
CSDE1-204ENST00000369530 ZNRD1Q9P1U0 126 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 ZNF492Q9P255 531 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 COX7A1P24310 79 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 LOXL3P58215 753 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 UBE2D3P61077 147 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 UBE2D2P62837 147 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 BCL6BQ8N143 479 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-204ENST00000369530 MGST2Q99735 147 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 LINC00473A8K010 186 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 GGTLC3B5MD39 225 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 NPIPB6E9PJ23 425 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 ACTL6BO94805 426 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 FAM106CPP0CH98 169 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 MFAP2P55001 183 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 PRR20EP86478 221 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 PRR20CP86479 221 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 PRR20DP86480 221 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 PRR20BP86481 221 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 PRR20AP86496 221 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 C12orf74Q32Q52 190 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 FAM106AQ4KMX7 169 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 U3KQK5 164 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 TNCP24821 2201 aa5.33□□□□□ -1.56
CSDE1-204ENST00000369530 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 M0R2P5 195 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 HAX1O00165 279 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 C8orf88P0DMB2 117 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
CSDE1-204ENST00000369530 OR10J6PQ8NGY7 276 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 CHAC1Q9BUX1 264 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 SSBP3Q9BWW4 388 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-204ENST00000369530 M0R1W7 72 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 MAPK1IP1LQ8NDC0 245 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 NAV2Q8IVL1 2488 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 A8MWL6 223 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 CRYGDP07320 174 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 DLX1P56177 255 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 MORN3Q6PF18 240 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-204ENST00000369530 ZNF714Q96N38 554 aa5.32□□□□□ -1.56
CSDE1-204ENST00000369530 TRBV7-3A0A075B6L6 115 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 IGHV4-38-2P0DP08 117 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 FXYD3Q14802 87 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 PLGLAQ15195 96 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 TCF19Q9Y242 345 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 TRBV7-7A0A0K0K1E9 115 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 J3KT08 172 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 APELAP0DMC3 54 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 GCSHP23434 173 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 PPIFP30405 207 aaKnown RBP5.31□□□□□ -1.56
CSDE1-204ENST00000369530 CSN1S1P47710 185 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 MOB3BQ86TA1 216 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 KIR2DL5BQ8NHK3 375 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-204ENST00000369530 ZNF503Q96F45 646 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 ONECUT1Q9UBC0 465 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 KLF12Q9Y4X4 402 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 DUTP33316 252 aaKnown RBP5.31□□□□□ -1.56
CSDE1-204ENST00000369530 NMUP48645 174 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 ZNF134P52741 427 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 PROK1P58294 105 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 FAM159AQ6UWV7 190 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 TIMD4Q96H15 378 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 RPUSD1Q9UJJ7 312 aaKnown RBP5.31□□□□□ -1.56
CSDE1-204ENST00000369530 HHLA3Q9XRX5 114 aa5.31□□□□□ -1.56
CSDE1-204ENST00000369530 TRAV5A0A0B4J249 113 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 SAA2P0DJI9 122 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-204ENST00000369530 STPG3Q8N7X2 389 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 RASL11BQ9BPW5 248 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 MLST8Q9BVC4 326 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 DEFA4P12838 97 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 MEIG1Q5JSS6 88 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 AMTNQ6UX39 209 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 PCP2Q8IVA1 136 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 LINC00311Q8N616 119 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 DUX5Q96PT3 197 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 SLC25A2Q9BXI2 301 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 SPINK4O60575 86 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms