RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 Q8NA96 180 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 NPBQ8NG41 125 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 BBC3Q96PG8 261 aaPredicted RBP8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 RALYQ9UKM9 306 aaKnown RBP8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 TACC2O95359 2948 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 ROS1P08922 2347 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 ICE1Q9Y2F5 2266 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 TRGV3P03979 118 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 DYNAPQ8N1N2 210 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 CFHR4Q92496 578 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 TOMM6Q96B49 74 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 SMIM2Q9BVW6 85 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 C21orf62Q9NYP8 219 aa8.11□□□□□ -1.11
LYSMD1-201ENST00000368908 PPIFP30405 207 aaKnown RBP8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 XGP55808 180 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 FHL3Q13643 280 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 NEXN-AS1Q8NBZ9 246 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 TRBV20-1A0A075B6N2 111 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 EFNA4P52798 201 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 ERCC8Q13216 396 aa8.1□□□□□ -1.11
LYSMD1-201ENST00000368908 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 LINC01549A6NIU2 74 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 J3KRW8 73 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 HLA-DMBP28068 263 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 ZNF843Q8N446 348 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 RNASE6Q93091 150 aaKnown RBP8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 CARD19Q96LW7 228 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 ABCA1O95477 2261 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 M0QXV9 152 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 TIMM23O14925 209 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 MRPL53Q96EL3 112 aaKnown RBP8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.11
LYSMD1-201ENST00000368908 POLEQ07864 2286 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 CD7P09564 240 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 COX6B1P14854 86 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 COX7A1P24310 79 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 PSMB2P49721 201 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 BSPH1Q075Z2 132 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 SCGB3A1Q96QR1 104 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 S4R3C0 116 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 ZNF815PA8K554 130 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 HIF1ANQ9NWT6 349 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 C11orf21Q9P2W6 132 aa8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 HRNRQ86YZ3 2850 aaPredicted RBP8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 SPTBN1Q01082 2364 aaKnown RBP8.08□□□□□ -1.12
LYSMD1-201ENST00000368908 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 DLX1P56177 255 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 RNF183Q96D59 192 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 DYNLRB1Q9NP97 96 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 UFC1Q9Y3C8 167 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 SPTAN1Q13813 2472 aaKnown RBP8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 TRAV26-2A0A0B4J265 109 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 A8MWV9 139 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 CTSGP08311 255 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 GLMPQ8WWB7 406 aa8.07□□□□□ -1.12
LYSMD1-201ENST00000368908 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 CENPVL3A0A0U1RRI6 287 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 CSMD2Q7Z408 3487 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 M0R381 172 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 SPANXN1Q5VSR9 72 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 ZFAND6Q6FIF0 208 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 NDUFA11Q86Y39 141 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 FAM57AQ8TBR7 257 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 ANAPC13Q9BS18 74 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 DPM3Q9P2X0 92 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 FAM208BQ5VWN6 2430 aa8.06□□□□□ -1.12
LYSMD1-201ENST00000368908 SUMO2P61956 95 aaKnown RBP8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 ZFP2Q6ZN57 461 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 CITED1Q99966 193 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 AGPAT4-IT1Q9H0P7 198 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 CENPEQ02224 2701 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 TCL1BO95988 128 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 PRB1P04280 392 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 PRB3Q04118 309 aaPredicted RBP8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 GAGE5Q13069 117 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 GAGE6Q13070 117 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 C9orf47Q6ZRZ4 202 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 RASL10AQ92737 203 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
LYSMD1-201ENST00000368908 PRSS29PA6NIE9 313 aa8.04□□□□□ -1.12
LYSMD1-201ENST00000368908 SRD5A1P18405 259 aa8.04□□□□□ -1.12
LYSMD1-201ENST00000368908 HERVK_113P61574 105 aa8.04□□□□□ -1.12
LYSMD1-201ENST00000368908 PTH2Q96A98 100 aa8.04□□□□□ -1.12
LYSMD1-201ENST00000368908 HIVEP3Q5T1R4 2406 aa8.04□□□□□ -1.12
LYSMD1-201ENST00000368908 A0A0J9YY99 117 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms