RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CD300EQ496F6 205 aaPredicted RBP6.31□□□□□ -1.4
CD46-208ENST00000367042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 SLC50A1Q9BRV3 221 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 DOPEY2Q9Y3R5 2298 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 NOTCH3Q9UM47 2321 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 LINC01548A6NM66 108 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 Q5PR19 223 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 ZNF815PA8K554 130 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 IGF1P05019 195 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 PAX8Q06710 450 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 LINC01559Q495D7 138 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 RPL39LQ96EH5 51 aaKnown RBP6.3□□□□□ -1.4
CD46-208ENST00000367042 UBTD1Q9HAC8 227 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 A0A087WX48 190 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 IGHV3-11P01762 117 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 SRD5A1P18405 259 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 PSMB2P49721 201 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 FOXI2Q6ZQN5 318 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 EEF1AKMT3Q96AZ1 226 aa6.3□□□□□ -1.4
CD46-208ENST00000367042 CSPG4Q6UVK1 2322 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 H7C1H1 209 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
CD46-208ENST00000367042 PLNP26678 52 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
CD46-208ENST00000367042 RAB9AP51151 201 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 HIGD1BQ9P298 99 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 SCGB1C2P0DMR2 95 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 ATP5G2Q06055 141 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 TMEM190Q8WZ59 177 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 NCOR2Q9Y618 2525 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 COL12A1Q99715 3063 aa6.29□□□□□ -1.4
CD46-208ENST00000367042 F8VRH5 84 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 H7C2G1 150 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 M0R1W7 72 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 ZFP36P26651 326 aaKnown RBP6.28□□□□□ -1.4
CD46-208ENST00000367042 Q8N9W7 124 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 OR10J6PQ8NGY7 276 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 SMIM2Q9BVW6 85 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 MYMXA0A1B0GTQ4 84 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 F6UB75 175 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 SAA4P35542 130 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 INSL3P51460 131 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
CD46-208ENST00000367042 PSMG4Q5JS54 123 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 FAM74A4Q5TZK3 123 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 KLHL30-AS1Q8NEE0 82 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 F8W1H4 67 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 HLA-DRB4P13762 266 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 SLC25A16P16260 332 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 CLEC2AQ6UVW9 174 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 C2orf66Q6UXQ4 117 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
CD46-208ENST00000367042 IGKV3-20P01619 116 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 ASIPP42127 132 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 LY6EQ16553 131 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 ORMDL2Q53FV1 153 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 MSRB2Q9Y3D2 182 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 E9PLD3 99 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 NDUFS8O00217 210 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 CDSNQ15517 529 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 RRN3P1Q2M238 152 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 NRACQ8N912 160 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 FAM110DQ8TAY7 271 aaPredicted RBP6.27□□□□□ -1.41
CD46-208ENST00000367042 CCDC140Q96MF4 163 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 ZNF48Q96MX3 618 aaPredicted RBP6.27□□□□□ -1.41
CD46-208ENST00000367042 SPAG8Q99932 426 aaPredicted RBP6.27□□□□□ -1.41
CD46-208ENST00000367042 ZMAT4Q9H898 229 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 IGHV7-4-1A0A0J9YVY3 117 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 ODF3BA8MYP8 253 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 PRR9Q5T870 116 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
CD46-208ENST00000367042 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
CD46-208ENST00000367042 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 A6NJY4 79 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 GNRH2O43555 120 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 ANXA2RQ3ZCQ2 193 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 A0A087WWL8 130 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 CIDEAO60543 219 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 BRD3OSQ6XYD6 125 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
CD46-208ENST00000367042 ZNF256Q9Y2P7 627 aaPredicted RBP6.26□□□□□ -1.41
CD46-208ENST00000367042 CHD8Q9HCK8 2581 aa6.26□□□□□ -1.41
CD46-208ENST00000367042 IGLV2-18A0A075B6J9 118 aa6.25□□□□□ -1.41
CD46-208ENST00000367042 TRAV8-2A0A0B4J237 113 aa6.25□□□□□ -1.41
CD46-208ENST00000367042 TRAV21A0A0B4J279 112 aa6.25□□□□□ -1.41
CD46-208ENST00000367042 A0A1B0GV72 72 aa6.25□□□□□ -1.41
CD46-208ENST00000367042 MINOS1Q5TGZ0 78 aa6.25□□□□□ -1.41
CD46-208ENST00000367042 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms