RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MSRB1Q9NZV6 116 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 DOPEY2Q9Y3R5 2298 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 SMKR1H3BMG3 65 aa17.18■□□□□ 0.34
LDB1-201ENST00000361198 C9orf139Q6ZV77 190 aa17.18■□□□□ 0.34
LDB1-201ENST00000361198 CD5LO43866 347 aa17.18■□□□□ 0.34
LDB1-201ENST00000361198 IGHV4-31P0DP07 118 aa17.18■□□□□ 0.34
LDB1-201ENST00000361198 ANKRD39Q53RE8 183 aa17.17■□□□□ 0.34
LDB1-201ENST00000361198 C10orf99Q6UWK7 81 aa17.17■□□□□ 0.34
LDB1-201ENST00000361198 IFI27L1Q96BM0 104 aa17.17■□□□□ 0.34
LDB1-201ENST00000361198 ZNF580Q9UK33 172 aa17.17■□□□□ 0.34
LDB1-201ENST00000361198 DEFB113Q30KQ7 82 aa17.17■□□□□ 0.34
LDB1-201ENST00000361198 C11orf21Q9P2W6 132 aa17.17■□□□□ 0.34
LDB1-201ENST00000361198 TEX15Q9BXT5 2789 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 K7EP13 123 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 PSMB8P28062 276 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 TM4SF20Q53R12 229 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 PRSS57Q6UWY2 283 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 IGKV3D-20A0A0C4DH25 116 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 SOCS3O14543 225 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 CACNG7P62955 275 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 FOXE3Q13461 319 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 CBY1Q9Y3M2 126 aa17.16■□□□□ 0.34
LDB1-201ENST00000361198 ZNF469Q96JG9 3925 aaPredicted RBP17.15■□□□□ 0.34
LDB1-201ENST00000361198 FXYD7P58549 80 aa17.15■□□□□ 0.34
LDB1-201ENST00000361198 VAMP3Q15836 100 aa17.15■□□□□ 0.34
LDB1-201ENST00000361198 Q5PR19 223 aa17.15■□□□□ 0.34
LDB1-201ENST00000361198 MAP1LC3AQ9H492 121 aa17.15■□□□□ 0.34
LDB1-201ENST00000361198 PEF1Q9UBV8 284 aaKnown RBP17.15■□□□□ 0.34
LDB1-201ENST00000361198 APCP25054 2843 aa17.14■□□□□ 0.34
LDB1-201ENST00000361198 FSHBP01225 129 aa17.14■□□□□ 0.33
LDB1-201ENST00000361198 RHPN1-AS1Q9BWJ2 59 aa17.14■□□□□ 0.33
LDB1-201ENST00000361198 IGHV7-4-1A0A0J9YVY3 117 aa17.14■□□□□ 0.33
LDB1-201ENST00000361198 RPL11P62913 178 aaKnown RBP17.14■□□□□ 0.33
LDB1-201ENST00000361198 Q6ZQT7 251 aa17.14■□□□□ 0.33
LDB1-201ENST00000361198 BOD1L2Q8IYS8 172 aa17.14■□□□□ 0.33
LDB1-201ENST00000361198 BEX4Q9NWD9 120 aaPredicted RBP17.14■□□□□ 0.33
LDB1-201ENST00000361198 DAZ1Q9NQZ3 744 aaKnown RBP17.13■□□□□ 0.33
LDB1-201ENST00000361198 SELENOKQ9Y6D0 94 aa17.13■□□□□ 0.33
LDB1-201ENST00000361198 IGKV3-7A0A075B6H7 116 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 EDN2P20800 178 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 DEFB1P60022 68 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 OR4C5Q8NGB2 326 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 SNAI2O43623 268 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 GAS8-AS1O95177 125 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 SEC11AP67812 179 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 TMEM97Q5BJF2 176 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 NXT2Q9NPJ8 142 aaKnown RBP17.12■□□□□ 0.33
LDB1-201ENST00000361198 VPREB3Q9UKI3 123 aa17.12■□□□□ 0.33
LDB1-201ENST00000361198 PRRC2AP48634 2157 aaKnown RBP17.11■□□□□ 0.33
LDB1-201ENST00000361198 TNFRSF6BO95407 300 aa17.11■□□□□ 0.33
LDB1-201ENST00000361198 PRR9Q5T870 116 aa17.1■□□□□ 0.33
LDB1-201ENST00000361198 Q6YL49 198 aa17.1■□□□□ 0.33
LDB1-201ENST00000361198 LRRC75A-AS1Q8N1F1 130 aa17.1■□□□□ 0.33
LDB1-201ENST00000361198 RNASE8Q8TDE3 154 aaKnown RBP17.1■□□□□ 0.33
LDB1-201ENST00000361198 SIVA1O15304 175 aa17.09■□□□□ 0.33
LDB1-201ENST00000361198 FCER1GP30273 86 aa17.09■□□□□ 0.33
LDB1-201ENST00000361198 Q96MF0 132 aa17.09■□□□□ 0.33
LDB1-201ENST00000361198 SMPXQ9UHP9 88 aa17.09■□□□□ 0.33
LDB1-201ENST00000361198 ERASQ7Z444 233 aa17.08■□□□□ 0.33
LDB1-201ENST00000361198 OR9G4Q8NGQ1 327 aa17.08■□□□□ 0.33
LDB1-201ENST00000361198 LENEPQ9Y5L5 61 aa17.08■□□□□ 0.33
LDB1-201ENST00000361198 OVOL1O14753 267 aa17.08■□□□□ 0.32
LDB1-201ENST00000361198 SRD5A1P18405 259 aa17.08■□□□□ 0.32
LDB1-201ENST00000361198 OR10J6PQ8NGY7 276 aa17.08■□□□□ 0.32
LDB1-201ENST00000361198 LINC00477Q96M19 166 aa17.08■□□□□ 0.32
LDB1-201ENST00000361198 CBY3A6NI87 242 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 J3KRW8 73 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 K7EMT4 169 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 TLN2Q9Y4G6 2542 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 F6UB75 175 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 HOXA3O43365 443 aaPredicted RBP17.07■□□□□ 0.32
LDB1-201ENST00000361198 LEPP41159 167 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 ZMAT4Q9H898 229 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 DKK2Q9UBU2 259 aa17.07■□□□□ 0.32
LDB1-201ENST00000361198 TMEM89A2RUT3 159 aa17.06■□□□□ 0.32
LDB1-201ENST00000361198 PSMG4Q5JS54 123 aa17.06■□□□□ 0.32
LDB1-201ENST00000361198 AMMECR1LQ6DCA0 310 aa17.06■□□□□ 0.32
LDB1-201ENST00000361198 IGLV2-18A0A075B6J9 118 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 PRSS47A8MTI9 375 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 RBX1P62877 108 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 KRTAP1-3Q8IUG1 177 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 ZFAND2AQ8N6M9 145 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 IGHV4-4A0A075B6R2 117 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 C7orf71A4D174 169 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 Q8N8P6 123 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 ZNF702PQ9H963 129 aa17.05■□□□□ 0.32
LDB1-201ENST00000361198 GATA1P15976 413 aaPredicted RBP17.04■□□□□ 0.32
LDB1-201ENST00000361198 EVI2AP22794 236 aa17.04■□□□□ 0.32
LDB1-201ENST00000361198 ADAMTSL5Q6ZMM2 481 aa17.04■□□□□ 0.32
LDB1-201ENST00000361198 TRAV8-6A0A0B4J262 113 aa17.04■□□□□ 0.32
LDB1-201ENST00000361198 ODF1Q14990 250 aa17.04■□□□□ 0.32
LDB1-201ENST00000361198 WFDC3Q8IUB2 231 aa17.04■□□□□ 0.32
LDB1-201ENST00000361198 C18orf15Q96N68 181 aa17.04■□□□□ 0.32
LDB1-201ENST00000361198 CHD6Q8TD26 2715 aa17.03■□□□□ 0.32
LDB1-201ENST00000361198 HSD52Q0P140 79 aa17.03■□□□□ 0.32
LDB1-201ENST00000361198 TENM4Q6N022 2769 aa17.03■□□□□ 0.32
LDB1-201ENST00000361198 OR2K2Q8NGT1 345 aa17.03■□□□□ 0.32
LDB1-201ENST00000361198 HHLA3Q9XRX5 114 aa17.03■□□□□ 0.32
LDB1-201ENST00000361198 UFC1Q9Y3C8 167 aa17.02■□□□□ 0.32
LDB1-201ENST00000361198 PCP2Q8IVA1 136 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms