RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 C5orf38Q86SI9 138 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 LRRK1Q38SD2 2015 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 IGKV3D-7A0A0C4DH55 119 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 H0YGX0 51 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 ATOX1O00244 68 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 LENEPQ9Y5L5 61 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 ICOSQ9Y6W8 199 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 ARTNQ5T4W7 220 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 IGFL3Q6UXB1 125 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 ZNF503-AS2A6NEH8 195 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 K7EQD1 137 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 PROP1O75360 226 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 H3BQ85 93 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 TIMM17AQ99595 171 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 IGLV1-44P01699 117 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 POU2AF1Q16633 256 aa11.69□□□□□ -0.54
LMX1B-201ENST00000355497 IGLL5B9A064 214 aa11.68□□□□□ -0.54
LMX1B-201ENST00000355497 SMIM20Q8N5G0 67 aa11.68□□□□□ -0.54
LMX1B-201ENST00000355497 NREPQ16612 68 aa11.68□□□□□ -0.54
LMX1B-201ENST00000355497 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
LMX1B-201ENST00000355497 KLF2Q9Y5W3 355 aaPredicted RBP11.68□□□□□ -0.54
LMX1B-201ENST00000355497 IGLV2-23P01705 113 aa11.68□□□□□ -0.54
LMX1B-201ENST00000355497 SND1-IT1Q9HBX3 110 aa11.68□□□□□ -0.54
LMX1B-201ENST00000355497 C9orf47Q6ZRZ4 202 aa11.67□□□□□ -0.54
LMX1B-201ENST00000355497 VPREB3Q9UKI3 123 aa11.67□□□□□ -0.54
LMX1B-201ENST00000355497 WDR90Q96KV7 1748 aa11.67□□□□□ -0.54
LMX1B-201ENST00000355497 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
LMX1B-201ENST00000355497 MRPL36Q9P0J6 103 aaKnown RBP11.67□□□□□ -0.54
LMX1B-201ENST00000355497 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
LMX1B-201ENST00000355497 CCL24O00175 119 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 COX7A2LO14548 114 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 PROK2Q9HC23 129 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 RNF152Q8N8N0 203 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 IGFBPL1Q8WX77 278 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 OPRPNQ99935 248 aaPredicted RBP11.66□□□□□ -0.54
LMX1B-201ENST00000355497 KAAG1Q9UBP8 84 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
LMX1B-201ENST00000355497 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
LMX1B-201ENST00000355497 SPATA25Q9BR10 227 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 GYPEP15421 78 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 HIST2H2BCQ6DN03 193 aa11.66□□□□□ -0.54
LMX1B-201ENST00000355497 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.54
LMX1B-201ENST00000355497 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
LMX1B-201ENST00000355497 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
LMX1B-201ENST00000355497 DAZ4Q86SG3 579 aaKnown RBP11.65□□□□□ -0.54
LMX1B-201ENST00000355497 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
LMX1B-201ENST00000355497 DAZ3Q9NR90 486 aaKnown RBP11.65□□□□□ -0.54
LMX1B-201ENST00000355497 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
LMX1B-201ENST00000355497 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
LMX1B-201ENST00000355497 Q6ZVH6 145 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 BRK1Q8WUW1 75 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 FAM236AA0A1B0GUQ0 79 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 FAM236BA0A1B0GV22 79 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 NCR3O14931 201 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 THADAQ6YHU6 1953 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 IGHV3-30P01768 117 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 IGHV3-33P01772 117 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 IGHV3-30-3P0DP02 117 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 IGHV3-30-5P0DP03 117 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 SIPA1L1O43166 1804 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 UBE2AP49459 152 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 IL15RAQ13261 267 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 C9orf66Q5T8R8 295 aa11.64□□□□□ -0.55
LMX1B-201ENST00000355497 IGLV10-54A0A075B6I4 117 aa11.63□□□□□ -0.55
LMX1B-201ENST00000355497 SPRY2O43597 315 aa11.63□□□□□ -0.55
LMX1B-201ENST00000355497 IGHV4-59P01825 116 aa11.63□□□□□ -0.55
LMX1B-201ENST00000355497 AHCTF1Q8WYP5 2266 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 DEFB136Q30KP8 78 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 DOCK6Q96HP0 2047 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 A4D1N5 150 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 J3QKU1 62 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 ATP5G1P05496 136 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 CCL18P55774 89 aa11.62□□□□□ -0.55
LMX1B-201ENST00000355497 PIFOQ8TCI5 191 aa11.61□□□□□ -0.55
LMX1B-201ENST00000355497 SLURP1P55000 103 aa11.61□□□□□ -0.55
LMX1B-201ENST00000355497 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
LMX1B-201ENST00000355497 SPART-AS1P0CW21 52 aa11.61□□□□□ -0.55
LMX1B-201ENST00000355497 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
LMX1B-201ENST00000355497 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
LMX1B-201ENST00000355497 WISP1O95388 367 aa11.6□□□□□ -0.55
LMX1B-201ENST00000355497 TMEM61Q8N0U2 210 aa11.6□□□□□ -0.55
LMX1B-201ENST00000355497 SPTSSBQ8NFR3 76 aa11.6□□□□□ -0.55
LMX1B-201ENST00000355497 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
LMX1B-201ENST00000355497 FAM215AQ9Y5M1 114 aa11.6□□□□□ -0.55
LMX1B-201ENST00000355497 NDUFA1O15239 70 aa11.59□□□□□ -0.55
LMX1B-201ENST00000355497 GP9P14770 177 aa11.59□□□□□ -0.55
LMX1B-201ENST00000355497 RSPO1Q2MKA7 263 aaPredicted RBP11.59□□□□□ -0.55
LMX1B-201ENST00000355497 NPBQ8NG41 125 aa11.59□□□□□ -0.55
LMX1B-201ENST00000355497 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
LMX1B-201ENST00000355497 TP53BP1Q12888 1972 aaPredicted RBP11.59□□□□□ -0.55
LMX1B-201ENST00000355497 IGLV3-1P01715 115 aa11.59□□□□□ -0.55
LMX1B-201ENST00000355497 JMJD7-PLA2G4BH0Y9G9 81 aa11.58□□□□□ -0.56
LMX1B-201ENST00000355497 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
LMX1B-201ENST00000355497 CENPVL3A0A0U1RRI6 287 aa11.58□□□□□ -0.56
LMX1B-201ENST00000355497 CTSZQ9UBR2 303 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms