RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CMTM2Q8TAZ6 248 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 TMED6Q8WW62 240 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 HYLS1Q96M11 299 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 OTORQ9NRC9 128 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
DDX55-202ENST00000354291 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
DDX55-202ENST00000354291 PGPA6NDG6 321 aa10.62□□□□□ -0.71
DDX55-202ENST00000354291 IGHV3-53P01767 116 aa10.62□□□□□ -0.71
DDX55-202ENST00000354291 WFDC10BQ8IUB3 73 aa10.62□□□□□ -0.71
DDX55-202ENST00000354291 Q8N814 137 aa10.62□□□□□ -0.71
DDX55-202ENST00000354291 WFDC1Q9HC57 220 aa10.62□□□□□ -0.71
DDX55-202ENST00000354291 C1QBP02746 253 aa10.61□□□□□ -0.71
DDX55-202ENST00000354291 CRYGDP07320 174 aa10.61□□□□□ -0.71
DDX55-202ENST00000354291 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
DDX55-202ENST00000354291 FAM159AQ6UWV7 190 aa10.61□□□□□ -0.71
DDX55-202ENST00000354291 SPXQ9BT56 116 aa10.61□□□□□ -0.71
DDX55-202ENST00000354291 HHLA3Q9XRX5 114 aa10.61□□□□□ -0.71
DDX55-202ENST00000354291 LRP2P98164 4655 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 K7EP13 123 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 MRPL23Q16540 153 aaKnown RBP10.6□□□□□ -0.71
DDX55-202ENST00000354291 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 OR10G4Q8NGN3 311 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 OR10G9Q8NGN4 311 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 OR10G7Q8NGN6 311 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 ALG5Q9Y673 324 aa10.6□□□□□ -0.71
DDX55-202ENST00000354291 CRYBA4P53673 196 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 RAB2AP61019 212 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 FHL2Q14192 279 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 TMEM183BQ1AE95 376 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 TMEM183AQ8IXX5 376 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 RASL10AQ92737 203 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 C8orf49Q96NF6 230 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 RPH3ALQ9UNE2 315 aa10.59□□□□□ -0.71
DDX55-202ENST00000354291 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
DDX55-202ENST00000354291 EIF3GO75821 320 aaKnown RBP eCLIP10.58□□□□□ -0.72
DDX55-202ENST00000354291 TDRG1Q3Y452 100 aa10.58□□□□□ -0.72
DDX55-202ENST00000354291 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
DDX55-202ENST00000354291 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
DDX55-202ENST00000354291 PTTG1O95997 202 aa10.57□□□□□ -0.72
DDX55-202ENST00000354291 C10orf126Q8N4M7 172 aa10.57□□□□□ -0.72
DDX55-202ENST00000354291 OR2G3Q8NGZ4 309 aa10.57□□□□□ -0.72
DDX55-202ENST00000354291 MED28Q9H204 178 aa10.57□□□□□ -0.72
DDX55-202ENST00000354291 TRAV21A0A0B4J279 112 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 MBP02144 154 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 CDC34P49427 236 aaPredicted RBP10.56□□□□□ -0.72
DDX55-202ENST00000354291 SERF2P84101 59 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 Q6ZSA8 131 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 HSD17B11Q8NBQ5 300 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 PSMG3Q9BT73 122 aaPredicted RBP10.56□□□□□ -0.72
DDX55-202ENST00000354291 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 NAGKQ9UJ70 344 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
DDX55-202ENST00000354291 HMGB3O15347 200 aaKnown RBP10.55□□□□□ -0.72
DDX55-202ENST00000354291 SFTA3P0C7M3 94 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 STAG3L2P0CL84 134 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 STAG3L3P0CL85 134 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 ARL14EPLP0DKL9 152 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 ZNF479Q96JC4 524 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 Q9HAA7 133 aa10.55□□□□□ -0.72
DDX55-202ENST00000354291 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 K7EQM0 130 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 M0R2P5 195 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 GNRH2O43555 120 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 ORM1P02763 201 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 SRIP30626 198 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 KRTAP10-4P60372 401 aaPredicted RBP10.54□□□□□ -0.72
DDX55-202ENST00000354291 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
DDX55-202ENST00000354291 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 RAB24Q969Q5 203 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 TVP23CQ96ET8 276 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 NDFIP1Q9BT67 221 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 SDF2L1Q9HCN8 221 aa10.54□□□□□ -0.72
DDX55-202ENST00000354291 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 IGHV3-16A0A0C4DH30 117 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 K7EQD1 137 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 ATP6V0CP27449 155 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 GCHFRP30047 84 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 GNG5P63218 68 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 SUN5Q8TC36 379 aa10.53□□□□□ -0.72
DDX55-202ENST00000354291 C9JCJ5 164 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 F6UZH7 168 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 CXorf1O96002 111 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 GYPEP15421 78 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 INO80EQ8NBZ0 244 aaPredicted RBP10.52□□□□□ -0.73
DDX55-202ENST00000354291 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 TMEM167BQ9NRX6 74 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 TNFSF18Q9UNG2 199 aa10.52□□□□□ -0.73
DDX55-202ENST00000354291 TCRAP04437 139 aa10.51□□□□□ -0.73
DDX55-202ENST00000354291 TYMSP04818 313 aa10.51□□□□□ -0.73
DDX55-202ENST00000354291 GIPP09681 153 aaPredicted RBP10.51□□□□□ -0.73
DDX55-202ENST00000354291 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
DDX55-202ENST00000354291 LINC01620Q4KN68 170 aa10.51□□□□□ -0.73
DDX55-202ENST00000354291 SGK494Q96LW2 274 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms