RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PPP1R2P9O14990 202 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 MUC21Q5SSG8 566 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 TMEM256Q8N2U0 113 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 OR2D3Q8NGH3 330 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 NAGKQ9UJ70 344 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 CT83Q5H943 113 aa19.67■□□□□ 0.74
SSBP4-202ENST00000348495 LINC00467Q9BRT7 94 aa19.67■□□□□ 0.74
SSBP4-202ENST00000348495 TMEM189A5PLL7 270 aa19.66■□□□□ 0.74
SSBP4-202ENST00000348495 FAM159AQ6UWV7 190 aa19.66■□□□□ 0.74
SSBP4-202ENST00000348495 ZNF705AQ6ZN79 300 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-202ENST00000348495 PYGO2Q9BRQ0 406 aa19.66■□□□□ 0.74
SSBP4-202ENST00000348495 CTDSP1Q9GZU7 261 aa19.66■□□□□ 0.74
SSBP4-202ENST00000348495 RPS10P5Q9NQ39 176 aa19.66■□□□□ 0.74
SSBP4-202ENST00000348495 IGHV1OR15-1A0A075B7D0 117 aa19.65■□□□□ 0.74
SSBP4-202ENST00000348495 GOLT1BQ9Y3E0 138 aa19.65■□□□□ 0.74
SSBP4-202ENST00000348495 LINC01587Q99440 93 aa19.65■□□□□ 0.74
SSBP4-202ENST00000348495 TMEM242Q9NWH2 141 aa19.65■□□□□ 0.74
SSBP4-202ENST00000348495 KCNS1Q96KK3 526 aa19.64■□□□□ 0.73
SSBP4-202ENST00000348495 TMSB15BA0A087X1C1 80 aa19.63■□□□□ 0.73
SSBP4-202ENST00000348495 Q6ZWC4 215 aa19.63■□□□□ 0.73
SSBP4-202ENST00000348495 TMEM208Q9BTX3 173 aa19.62■□□□□ 0.73
SSBP4-202ENST00000348495 FBN3Q75N90 2809 aa19.62■□□□□ 0.73
SSBP4-202ENST00000348495 CXCL1P09341 107 aa19.62■□□□□ 0.73
SSBP4-202ENST00000348495 RPS20P60866 119 aaKnown RBP19.62■□□□□ 0.73
SSBP4-202ENST00000348495 IGHV3OR16-12A0A075B7B8 117 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 GNRH2O43555 120 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 TYMSP04818 313 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 GZMBP10144 247 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 DEFB135Q30KP9 77 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 TSKUQ8WUA8 353 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 TP53TG3Q9ULZ0 132 aa19.61■□□□□ 0.73
SSBP4-202ENST00000348495 A8MWL6 223 aa19.6■□□□□ 0.73
SSBP4-202ENST00000348495 PRM2P04554 102 aa19.6■□□□□ 0.73
SSBP4-202ENST00000348495 XKRY2A2RUG3 117 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 GRIFINA4D1Z8 144 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 DNLZQ5SXM8 178 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 GTSF1Q8WW33 167 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 DEFB121Q5J5C9 76 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 RNF183Q96D59 192 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 GFRA4Q9GZZ7 299 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 IL36BQ9NZH7 164 aa19.59■□□□□ 0.73
SSBP4-202ENST00000348495 SMIM27A0A1W2PRY6 76 aa19.58■□□□□ 0.72
SSBP4-202ENST00000348495 RCHY1Q96PM5 261 aa19.58■□□□□ 0.72
SSBP4-202ENST00000348495 FAM231BA6NCW3 169 aa19.57■□□□□ 0.72
SSBP4-202ENST00000348495 CBY3A6NI87 242 aa19.57■□□□□ 0.72
SSBP4-202ENST00000348495 HTN1P15515 57 aa19.57■□□□□ 0.72
SSBP4-202ENST00000348495 NEU1Q99519 415 aa19.57■□□□□ 0.72
SSBP4-202ENST00000348495 IGHV3-16A0A0C4DH30 117 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 IGLC6P0CF74 106 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 FOXA3P55318 350 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-202ENST00000348495 IMMP2LQ96T52 175 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 X6R8D5 127 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 NBEAL2Q6ZNJ1 2754 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 TRGV11A0A075B6L2 103 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 ASIPP42127 132 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 MDFICQ9P1T7 246 aa19.56■□□□□ 0.72
SSBP4-202ENST00000348495 RNASE3P12724 160 aaKnown RBP19.55■□□□□ 0.72
SSBP4-202ENST00000348495 AZU1P20160 251 aa19.55■□□□□ 0.72
SSBP4-202ENST00000348495 SBSPONQ8IVN8 264 aa19.55■□□□□ 0.72
SSBP4-202ENST00000348495 TCL1AP56279 114 aa19.54■□□□□ 0.72
SSBP4-202ENST00000348495 C11orf72Q8NBR9 251 aa19.54■□□□□ 0.72
SSBP4-202ENST00000348495 MRAPQ8TCY5 172 aa19.54■□□□□ 0.72
SSBP4-202ENST00000348495 SSBP4Q9BWG4 385 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-202ENST00000348495 TP53TG1Q9Y2A0 90 aa19.54■□□□□ 0.72
SSBP4-202ENST00000348495 CXorf65A6NEN9 183 aa19.54■□□□□ 0.72
SSBP4-202ENST00000348495 RNASE8Q8TDE3 154 aaKnown RBP19.54■□□□□ 0.72
SSBP4-202ENST00000348495 A0A1W2PPQ1 181 aa19.53■□□□□ 0.72
SSBP4-202ENST00000348495 HIGD1CA8MV81 97 aa19.53■□□□□ 0.72
SSBP4-202ENST00000348495 SPRY2O43597 315 aa19.53■□□□□ 0.72
SSBP4-202ENST00000348495 FER1L6-AS1Q8NA97 138 aa19.53■□□□□ 0.72
SSBP4-202ENST00000348495 OVOL2Q9BRP0 275 aa19.53■□□□□ 0.72
SSBP4-202ENST00000348495 SCRT2Q9NQ03 307 aa19.53■□□□□ 0.72
SSBP4-202ENST00000348495 SMIM9A6NGZ8 99 aa19.52■□□□□ 0.72
SSBP4-202ENST00000348495 MED14OSP0DP75 135 aa19.52■□□□□ 0.72
SSBP4-202ENST00000348495 RRN3P1Q2M238 152 aa19.52■□□□□ 0.72
SSBP4-202ENST00000348495 TMEM263Q8WUH6 116 aaKnown RBP19.52■□□□□ 0.72
SSBP4-202ENST00000348495 C9orf85Q96MD7 179 aa19.52■□□□□ 0.72
SSBP4-202ENST00000348495 NAT8BQ9UHF3 227 aa19.52■□□□□ 0.72
SSBP4-202ENST00000348495 H3BVH4 76 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 SNAI2O43623 268 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 SCO1O75880 301 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 OR5AL1P0C617 328 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 ARMS2P0C7Q2 107 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 S100A4P26447 101 aaKnown RBP19.51■□□□□ 0.71
SSBP4-202ENST00000348495 CTRLP40313 264 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 NUP35Q8NFH5 326 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 OR11H2Q8NH07 326 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 FAM3BP58499 235 aaPredicted RBP19.51■□□□□ 0.71
SSBP4-202ENST00000348495 TMEM88Q6PEY1 159 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 ZNF493Q6ZR52 646 aa19.51■□□□□ 0.71
SSBP4-202ENST00000348495 CBLN2Q8IUK8 224 aa19.5■□□□□ 0.71
SSBP4-202ENST00000348495 SMCO4Q9NRQ5 59 aa19.5■□□□□ 0.71
SSBP4-202ENST00000348495 PLAC8L1A1L4L8 177 aa19.49■□□□□ 0.71
SSBP4-202ENST00000348495 LYZL1Q6UWQ5 148 aa19.49■□□□□ 0.71
SSBP4-202ENST00000348495 C16orf74Q96GX8 76 aa19.49■□□□□ 0.71
SSBP4-202ENST00000348495 RETNQ9HD89 108 aa19.49■□□□□ 0.71
SSBP4-202ENST00000348495 GSN-AS1Q9NRJ2 163 aa19.49■□□□□ 0.71
SSBP4-202ENST00000348495 ZNF415Q09FC8 603 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 IL17DQ8TAD2 202 aa19.48■□□□□ 0.71
SSBP4-202ENST00000348495 PGLYRP4Q96LB8 373 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms