RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 C20orf78Q9BR46 151 aa12.79□□□□□ -0.36
RTL6-201ENST00000341255 EGR2P11161 476 aaPredicted RBP12.79□□□□□ -0.36
RTL6-201ENST00000341255 CARD19Q96LW7 228 aa12.79□□□□□ -0.36
RTL6-201ENST00000341255 H3BUA1 57 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 GAGE7O76087 117 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 GAGE12FP0CL80 117 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 GAGE12GP0CL81 117 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 GAGE12IP0CL82 117 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 TDRG1Q3Y452 100 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 C11orf53Q8IXP5 236 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 SHISA9B4DS77 424 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 FGF23Q9GZV9 251 aaPredicted RBP12.78□□□□□ -0.36
RTL6-201ENST00000341255 DYNAPQ8N1N2 210 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 TMEM243Q9BU79 118 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 ZNF561-AS1K7EIQ3 104 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 CTSZQ9UBR2 303 aa12.78□□□□□ -0.36
RTL6-201ENST00000341255 PTPRQQ9UMZ3 2332 aa12.77□□□□□ -0.36
RTL6-201ENST00000341255 NOTCH4Q99466 2003 aa12.77□□□□□ -0.37
RTL6-201ENST00000341255 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.37
RTL6-201ENST00000341255 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
RTL6-201ENST00000341255 UTF1Q5T230 341 aa12.77□□□□□ -0.37
RTL6-201ENST00000341255 ANAPC1Q9H1A4 1944 aa12.77□□□□□ -0.37
RTL6-201ENST00000341255 CFHR4Q92496 578 aa12.76□□□□□ -0.37
RTL6-201ENST00000341255 CDK2AP2O75956 126 aa12.76□□□□□ -0.37
RTL6-201ENST00000341255 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
RTL6-201ENST00000341255 J3QKU1 62 aa12.76□□□□□ -0.37
RTL6-201ENST00000341255 NXPH4O95158 308 aa12.76□□□□□ -0.37
RTL6-201ENST00000341255 RNF138Q8WVD3 245 aa12.76□□□□□ -0.37
RTL6-201ENST00000341255 KIAA1671Q9BY89 1806 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 APOC4P55056 127 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 GAGE6Q13070 117 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 LINC00173Q6ZV60 143 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
RTL6-201ENST00000341255 IGFL2Q6UWQ7 119 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 NTN5Q8WTR8 489 aaPredicted RBP12.75□□□□□ -0.37
RTL6-201ENST00000341255 AGPAT4-IT1Q9H0P7 198 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 FOXE3Q13461 319 aa12.75□□□□□ -0.37
RTL6-201ENST00000341255 GNRH2O43555 120 aa12.74□□□□□ -0.37
RTL6-201ENST00000341255 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
RTL6-201ENST00000341255 WT1P19544 449 aaPredicted RBP12.74□□□□□ -0.37
RTL6-201ENST00000341255 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
RTL6-201ENST00000341255 MED13Q9UHV7 2174 aa12.74□□□□□ -0.37
RTL6-201ENST00000341255 LYPD6Q86Y78 171 aa12.74□□□□□ -0.37
RTL6-201ENST00000341255 UBL5Q9BZL1 73 aa12.74□□□□□ -0.37
RTL6-201ENST00000341255 F6UB75 175 aa12.73□□□□□ -0.37
RTL6-201ENST00000341255 ACACBO00763 2458 aa12.73□□□□□ -0.37
RTL6-201ENST00000341255 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
RTL6-201ENST00000341255 HAMPP81172 84 aa12.73□□□□□ -0.37
RTL6-201ENST00000341255 ZNF493Q6ZR52 646 aa12.73□□□□□ -0.37
RTL6-201ENST00000341255 GRNP28799 593 aaKnown RBP12.72□□□□□ -0.37
RTL6-201ENST00000341255 SPRY2O43597 315 aa12.72□□□□□ -0.37
RTL6-201ENST00000341255 LHBP01229 141 aa12.72□□□□□ -0.37
RTL6-201ENST00000341255 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
RTL6-201ENST00000341255 CFC1P0CG37 223 aa12.72□□□□□ -0.37
RTL6-201ENST00000341255 VPREB3Q9UKI3 123 aa12.72□□□□□ -0.37
RTL6-201ENST00000341255 HERVK_113P63121 156 aa12.71□□□□□ -0.37
RTL6-201ENST00000341255 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.37
RTL6-201ENST00000341255 ANKRD39Q53RE8 183 aa12.71□□□□□ -0.37
RTL6-201ENST00000341255 SPRNQ5BIV9 151 aa12.71□□□□□ -0.37
RTL6-201ENST00000341255 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
RTL6-201ENST00000341255 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
RTL6-201ENST00000341255 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.37
RTL6-201ENST00000341255 GP9P14770 177 aa12.71□□□□□ -0.38
RTL6-201ENST00000341255 DEFB112Q30KQ8 113 aa12.71□□□□□ -0.38
RTL6-201ENST00000341255 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.38
RTL6-201ENST00000341255 IGF2BP2-AS1Q96M15 143 aa12.71□□□□□ -0.38
RTL6-201ENST00000341255 TRAV13-2A0A0B4J235 113 aa12.7□□□□□ -0.38
RTL6-201ENST00000341255 SH2D6Q7Z4S9 175 aa12.7□□□□□ -0.38
RTL6-201ENST00000341255 SCRT2Q9NQ03 307 aa12.7□□□□□ -0.38
RTL6-201ENST00000341255 CENPVL3A0A0U1RRI6 287 aa12.7□□□□□ -0.38
RTL6-201ENST00000341255 CRLF1O75462 422 aa12.7□□□□□ -0.38
RTL6-201ENST00000341255 IGHV4-59P01825 116 aa12.7□□□□□ -0.38
RTL6-201ENST00000341255 LINC01545Q5VT33 79 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 PATE2Q6UY27 113 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 Q6ZSR3 168 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 ANKRD29Q8N6D5 301 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 KRTAP27-1Q3LI81 207 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 TINCRA0A1B0GVN0 87 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 IGLL5B9A064 214 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 DKK4Q9UBT3 224 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
RTL6-201ENST00000341255 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
RTL6-201ENST00000341255 BOD1L2Q8IYS8 172 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 IGFBPL1Q8WX77 278 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 NKAPP1Q8N9T2 125 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 TRAV12-1A0A0B4J245 112 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 K7EMI3 77 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 TRACP01848 142 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
RTL6-201ENST00000341255 Q71RC1 249 aaPredicted RBP12.67□□□□□ -0.38
RTL6-201ENST00000341255 SPG11Q96JI7 2443 aa12.67□□□□□ -0.38
RTL6-201ENST00000341255 CRYBA4P53673 196 aa12.67□□□□□ -0.38
RTL6-201ENST00000341255 RBMY1FQ15415 496 aaKnown RBP12.67□□□□□ -0.38
RTL6-201ENST00000341255 RHOHQ15669 191 aa12.67□□□□□ -0.38
RTL6-201ENST00000341255 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms