RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 B4DEV8 164 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 ANXA2RQ3ZCQ2 193 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 MUC21Q5SSG8 566 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 OR11H2Q8NH07 326 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 ISOC2Q96AB3 205 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 NAGKQ9UJ70 344 aa12.94□□□□□ -0.34
SDCBP2-201ENST00000339987 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
SDCBP2-201ENST00000339987 RETNQ9HD89 108 aa12.93□□□□□ -0.34
SDCBP2-201ENST00000339987 RPS10P5Q9NQ39 176 aa12.93□□□□□ -0.34
SDCBP2-201ENST00000339987 ZNF705GA8MUZ8 300 aaPredicted RBP12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 SCO1O75880 301 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 P01737 135 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 ORM1P02763 201 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 RRN3P1Q2M238 152 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 NUDT10Q8NFP7 164 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 NUDT11Q96G61 164 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 RNASE7Q9H1E1 156 aaKnown RBP12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
SDCBP2-201ENST00000339987 CBY3A6NI87 242 aa12.91□□□□□ -0.34
SDCBP2-201ENST00000339987 NHLRC4P0CG21 123 aaPredicted RBP12.91□□□□□ -0.34
SDCBP2-201ENST00000339987 MIFP14174 115 aa12.91□□□□□ -0.34
SDCBP2-201ENST00000339987 ATRAIDQ6UW56 229 aa12.91□□□□□ -0.34
SDCBP2-201ENST00000339987 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
SDCBP2-201ENST00000339987 TRGV11A0A075B6L2 103 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 C7orf77A4D0Y5 90 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 CXCL1P09341 107 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 ERVFC1-1P60608 527 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 SFRP2Q96HF1 295 aa12.9□□□□□ -0.34
SDCBP2-201ENST00000339987 PRM2P04554 102 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 TYMSP04818 313 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 HTN1P15515 57 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 AZU1P20160 251 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 RPS20P60866 119 aaKnown RBP12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 C15orf54Q8N8G6 183 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 OR2D3Q8NGH3 330 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 RNASE8Q8TDE3 154 aaKnown RBP12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 C16orf74Q96GX8 76 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 RPP21Q9H633 154 aaKnown RBP12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
SDCBP2-201ENST00000339987 A0A087WWC5 75 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 GATCO43716 136 aaKnown RBP12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 CT83Q5H943 113 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 ZNF575Q86XF7 245 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 Q8NAQ8 132 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 OR10G8Q8NGN5 311 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 GNRH2O43555 120 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 MT-ND4LP03901 98 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
SDCBP2-201ENST00000339987 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
SDCBP2-201ENST00000339987 IGHV4-28A0A0C4DH34 117 aa12.87□□□□□ -0.35
SDCBP2-201ENST00000339987 XKRY2A2RUG3 117 aa12.87□□□□□ -0.35
SDCBP2-201ENST00000339987 ASIPP42127 132 aa12.87□□□□□ -0.35
SDCBP2-201ENST00000339987 ZNF415Q09FC8 603 aa12.87□□□□□ -0.35
SDCBP2-201ENST00000339987 CTDSP1Q9GZU7 261 aa12.87□□□□□ -0.35
SDCBP2-201ENST00000339987 PLAC8L1A1L4L8 177 aa12.86□□□□□ -0.35
SDCBP2-201ENST00000339987 PPP1R2P9O14990 202 aa12.86□□□□□ -0.35
SDCBP2-201ENST00000339987 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
SDCBP2-201ENST00000339987 MDFICQ9P1T7 246 aa12.86□□□□□ -0.35
SDCBP2-201ENST00000339987 V9GYV3 84 aa12.86□□□□□ -0.35
SDCBP2-201ENST00000339987 GRIFINA4D1Z8 144 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 A8MWL6 223 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 TCL1AP56279 114 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 IL17DQ8TAD2 202 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 ANAPC16Q96DE5 110 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 GSN-AS1Q9NRJ2 163 aa12.85□□□□□ -0.35
SDCBP2-201ENST00000339987 CXorf65A6NEN9 183 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 S100A4P26447 101 aaKnown RBP12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 RNF212Q495C1 297 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 TMEM88Q6PEY1 159 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 C9orf85Q96MD7 179 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 TMEM242Q9NWH2 141 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 IL36BQ9NZH7 164 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 NBEAL2Q6ZNJ1 2754 aa12.84□□□□□ -0.35
SDCBP2-201ENST00000339987 SNURFLB1AK76 121 aa12.83□□□□□ -0.36
SDCBP2-201ENST00000339987 CBLN2Q8IUK8 224 aa12.83□□□□□ -0.36
SDCBP2-201ENST00000339987 SPXQ9BT56 116 aa12.83□□□□□ -0.36
SDCBP2-201ENST00000339987 TGP01266 2768 aa12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 GZMBP10144 247 aa12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 DAZ2Q13117 558 aaKnown RBP12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 TSKUQ8WUA8 353 aa12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
SDCBP2-201ENST00000339987 A0A1W2PPQ1 181 aa12.81□□□□□ -0.36
SDCBP2-201ENST00000339987 FAM231BA6NCW3 169 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms