RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PMVKQ15126 192 aa12.7□□□□□ -0.38
NPHP3-201ENST00000337331 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
NPHP3-201ENST00000337331 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 CCDC179H3BU77 68 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 PRADC1Q9BSG0 188 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 IGHV3-73A0A0B4J1V6 119 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 OVOL3O00110 214 aa12.69□□□□□ -0.38
NPHP3-201ENST00000337331 TCF15Q12870 199 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 HTN3P15516 51 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 ATXN8Q156A1 80 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 TECTAO75443 2155 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 G3V318 75 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 POU2AF1Q16633 256 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 SORL1Q92673 2214 aa12.68□□□□□ -0.38
NPHP3-201ENST00000337331 B4DSR2 109 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 H3BMM0 161 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 ATP6V0E1O15342 81 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 UBE2WQ96B02 151 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 GNLYP22749 145 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 BRWD1-AS2P59051 145 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 IGFL3Q6UXB1 125 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 NACAE9PAV3 2078 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 VCYO14598 125 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 FOXE3Q13461 319 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 TEX36Q5VZQ5 186 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 ZFP2Q6ZN57 461 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 LINC00311Q8N616 119 aa12.67□□□□□ -0.38
NPHP3-201ENST00000337331 A0A087WWL8 130 aa12.66□□□□□ -0.38
NPHP3-201ENST00000337331 GATA1P15976 413 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-201ENST00000337331 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
NPHP3-201ENST00000337331 P0C879 139 aa12.66□□□□□ -0.38
NPHP3-201ENST00000337331 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
NPHP3-201ENST00000337331 PLA2G2CQ5R387 149 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 TMEM75Q8N9X5 138 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 USMG5Q96IX5 58 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 GAGE2AQ6NT46 116 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 Q8N7P7 452 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 TRGV4A0A0C4DH28 118 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 PATE2Q6UY27 113 aa12.65□□□□□ -0.38
NPHP3-201ENST00000337331 TLN1Q9Y490 2541 aaKnown RBP12.65□□□□□ -0.39
NPHP3-201ENST00000337331 PRSS46E5RG02 174 aa12.65□□□□□ -0.39
NPHP3-201ENST00000337331 NPC2P61916 151 aa12.65□□□□□ -0.39
NPHP3-201ENST00000337331 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.39
NPHP3-201ENST00000337331 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.39
NPHP3-201ENST00000337331 PRR25Q96S07 402 aa12.65□□□□□ -0.39
NPHP3-201ENST00000337331 TRAV8-3A0A0A6YYJ7 113 aa12.64□□□□□ -0.39
NPHP3-201ENST00000337331 ODF1Q14990 250 aa12.64□□□□□ -0.39
NPHP3-201ENST00000337331 NCOR2Q9Y618 2525 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 F8VRH5 84 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 M0QXV9 152 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 DAZ1Q9NQZ3 744 aaKnown RBP12.63□□□□□ -0.39
NPHP3-201ENST00000337331 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
NPHP3-201ENST00000337331 UBE2E1P51965 193 aa12.62□□□□□ -0.39
NPHP3-201ENST00000337331 RUSC1-AS1Q66K80 236 aa12.62□□□□□ -0.39
NPHP3-201ENST00000337331 K7ENP7 123 aa12.62□□□□□ -0.39
NPHP3-201ENST00000337331 WT1P19544 449 aaPredicted RBP12.62□□□□□ -0.39
NPHP3-201ENST00000337331 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
NPHP3-201ENST00000337331 IL17RELQ6ZVW7 336 aa12.62□□□□□ -0.39
NPHP3-201ENST00000337331 KLHL30-AS1Q8NEE0 82 aa12.62□□□□□ -0.39
NPHP3-201ENST00000337331 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
NPHP3-201ENST00000337331 C17orf77Q96MU5 243 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 IGF2RP11717 2491 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 FAM223BA6NKX1 122 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 FAM223AQ8IWN6 122 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 Q8N8P6 123 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 TMEM126AQ9H061 195 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 AGRNO00468 2067 aa12.61□□□□□ -0.39
NPHP3-201ENST00000337331 A0A087WX48 190 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 SYNJ2BPP57105 145 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 SPRNQ5BIV9 151 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 THAP8Q8NA92 274 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 M0R2P5 195 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 MAPKAPK5-AS1Q8N8E1 139 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 TMEM14CQ9P0S9 112 aa12.6□□□□□ -0.39
NPHP3-201ENST00000337331 FAM236AA0A1B0GUQ0 79 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 FAM236BA0A1B0GV22 79 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 ADARB2-AS1A8MUL3 147 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 H3BRN7 92 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 CTSZQ9UBR2 303 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 C19orf71A6NCJ1 209 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 ZNF491Q8N8L2 437 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 KAAG1Q9UBP8 84 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 KRTAP27-1Q3LI81 207 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 C1orf159Q96HA4 380 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 FAM110AQ9BQ89 295 aa12.59□□□□□ -0.39
NPHP3-201ENST00000337331 TCL1BO95988 128 aa12.58□□□□□ -0.39
NPHP3-201ENST00000337331 DSCR9P59020 149 aa12.58□□□□□ -0.39
NPHP3-201ENST00000337331 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms