RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 A0A1W2PPM0 123 aa16.35■□□□□ 0.21
PTDSS1-201ENST00000337004 TM4SF20Q53R12 229 aa16.35■□□□□ 0.21
PTDSS1-201ENST00000337004 UNQ9165/PRO28630Q6UXU0 137 aa16.35■□□□□ 0.21
PTDSS1-201ENST00000337004 TRBV25-1A0A075B6N4 114 aa16.35■□□□□ 0.21
PTDSS1-201ENST00000337004 J3KRW8 73 aa16.35■□□□□ 0.21
PTDSS1-201ENST00000337004 IGF1P05019 195 aa16.35■□□□□ 0.21
PTDSS1-201ENST00000337004 S100A4P26447 101 aaKnown RBP16.34■□□□□ 0.21
PTDSS1-201ENST00000337004 ZFAND2AQ8N6M9 145 aa16.34■□□□□ 0.21
PTDSS1-201ENST00000337004 SMIM2Q9BVW6 85 aa16.34■□□□□ 0.21
PTDSS1-201ENST00000337004 NBASA2RRP1 2371 aa16.34■□□□□ 0.21
PTDSS1-201ENST00000337004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.34■□□□□ 0.21
PTDSS1-201ENST00000337004 PLNP26678 52 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 BRD3OSQ6XYD6 125 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 GPHB5Q86YW7 130 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 USMG5Q96IX5 58 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 MEGF9Q9H1U4 602 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 MED13LQ71F56 2210 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 M0R381 172 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 TRBV12-3P01733 135 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 IGHV4-39P01824 125 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 FABP2P12104 132 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 ASIPP42127 132 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 LY6DQ14210 128 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 ORMDL2Q53FV1 153 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 OR5A1Q8NGJ0 315 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 SPCS1Q9Y6A9 102 aa16.33■□□□□ 0.2
PTDSS1-201ENST00000337004 FXYD2P54710 66 aa16.32■□□□□ 0.2
PTDSS1-201ENST00000337004 SOCS3O14543 225 aa16.31■□□□□ 0.2
PTDSS1-201ENST00000337004 SAMD5Q5TGI4 173 aa16.31■□□□□ 0.2
PTDSS1-201ENST00000337004 H3BUA1 57 aa16.31■□□□□ 0.2
PTDSS1-201ENST00000337004 C20orf78Q9BR46 151 aa16.31■□□□□ 0.2
PTDSS1-201ENST00000337004 DPH3P1Q9H4G8 78 aa16.31■□□□□ 0.2
PTDSS1-201ENST00000337004 PHLDA3Q9Y5J5 127 aa16.31■□□□□ 0.2
PTDSS1-201ENST00000337004 C19orf84I3L1E1 186 aa16.3■□□□□ 0.2
PTDSS1-201ENST00000337004 BRI3O95415 125 aa16.3■□□□□ 0.2
PTDSS1-201ENST00000337004 SUMO2P61956 95 aaKnown RBP16.3■□□□□ 0.2
PTDSS1-201ENST00000337004 RPL11P62913 178 aaKnown RBP16.3■□□□□ 0.2
PTDSS1-201ENST00000337004 TM2D2Q9BX73 214 aa16.3■□□□□ 0.2
PTDSS1-201ENST00000337004 TRAV12-1A0A0B4J245 112 aa16.3■□□□□ 0.2
PTDSS1-201ENST00000337004 H7C1H1 209 aa16.29■□□□□ 0.2
PTDSS1-201ENST00000337004 K7EMI3 77 aa16.29■□□□□ 0.2
PTDSS1-201ENST00000337004 CEND1Q8N111 149 aa16.29■□□□□ 0.2
PTDSS1-201ENST00000337004 MED14OSP0DP75 135 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 SLC25A16P16260 332 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 ANXA2RQ3ZCQ2 193 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 RASL10AQ92737 203 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 SCGB3A1Q96QR1 104 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 F8VRH5 84 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 IGHV3-11P01762 117 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 IGHG2P01859 326 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 RNASE4P34096 147 aaKnown RBP16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 LY6EQ16553 131 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 C14orf178Q8N769 122 aaPredicted RBP16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 TOMM6Q96B49 74 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 PIMREGQ9BSJ6 248 aa16.28■□□□□ 0.2
PTDSS1-201ENST00000337004 IGF2RP11717 2491 aa16.27■□□□□ 0.2
PTDSS1-201ENST00000337004 MAPKAPK5-AS1Q8N8E1 139 aa16.27■□□□□ 0.2
PTDSS1-201ENST00000337004 FAM19A4Q96LR4 140 aa16.27■□□□□ 0.2
PTDSS1-201ENST00000337004 TAL2Q16559 108 aa16.27■□□□□ 0.19
PTDSS1-201ENST00000337004 SELENOKQ9Y6D0 94 aa16.27■□□□□ 0.19
PTDSS1-201ENST00000337004 SVEP1Q4LDE5 3571 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 ATRXP46100 2492 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 TRBV7-9A0A0J9YWB2 115 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 IGHV4-61A0A0C4DH41 118 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 SPRY2O43597 315 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 PF4V1P10720 104 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 DEFB1P60022 68 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 KLK15Q9H2R5 256 aa16.26■□□□□ 0.19
PTDSS1-201ENST00000337004 PPP1R17O96001 155 aa16.25■□□□□ 0.19
PTDSS1-201ENST00000337004 APRG1Q8IVJ8 170 aa16.25■□□□□ 0.19
PTDSS1-201ENST00000337004 NHP2Q9NX24 153 aaKnown RBP16.25■□□□□ 0.19
PTDSS1-201ENST00000337004 CHTOPQ9Y3Y2 248 aaKnown RBP16.25■□□□□ 0.19
PTDSS1-201ENST00000337004 SAP30O75446 220 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 MGPP08493 103 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 RPL39LQ96EH5 51 aaKnown RBP16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 RHPN1-AS1Q9BWJ2 59 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 H3BUX3 64 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 IGHV4-38-2P0DP08 117 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 PHLDA1Q8WV24 401 aaPredicted RBP16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 SPOCK3Q9BQ16 436 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 CACNA1BQ00975 2339 aa16.24■□□□□ 0.19
PTDSS1-201ENST00000337004 A6NDX4 124 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 F6UB75 175 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 K7ERJ3 54 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 IGKV3-7A0A075B6H7 116 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 GNRH2O43555 120 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 COTL1Q14019 142 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 NEGR1Q7Z3B1 354 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 NEXN-AS1Q8NBZ9 246 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 COL6A6A6NMZ7 2263 aa16.23■□□□□ 0.19
PTDSS1-201ENST00000337004 GNLYP22749 145 aa16.22■□□□□ 0.19
PTDSS1-201ENST00000337004 C2orf66Q6UXQ4 117 aa16.22■□□□□ 0.19
PTDSS1-201ENST00000337004 OR11H12B2RN74 326 aa16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 RNASE3P12724 160 aaKnown RBP16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 BLCAPP62952 87 aa16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 OR11H1Q8NG94 326 aa16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 OR11H2Q8NH07 326 aa16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 DAZ1Q9NQZ3 744 aaKnown RBP16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 HIST1H4GQ99525 98 aa16.21■□□□□ 0.19
PTDSS1-201ENST00000337004 SPTBN1Q01082 2364 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms