RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DSCR9P59020 149 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 TMEM61Q8N0U2 210 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 THADAQ6YHU6 1953 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 LMO1P25800 156 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 VSIG2Q96IQ7 327 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 SPTBN2O15020 2390 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 FAM186AA6NE01 2351 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 LINC01619G3V211 115 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 H0YGX0 51 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 LGALS9O00182 355 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 ZFP36L1Q07352 338 aaKnown RBP7.74□□□□□ -1.17
COL4A6-201ENST00000334504 C8orf31Q8N9H6 132 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 IGFBPL1Q8WX77 278 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 HIGD1BQ9P298 99 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 MDS2Q8NDY4 140 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 PKIGQ9Y2B9 76 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 B4DSR2 109 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 MRPL53Q96EL3 112 aaKnown RBP7.74□□□□□ -1.17
COL4A6-201ENST00000334504 A0A0G2JNJ9 132 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 NDUFA4O00483 81 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 NREPQ16612 68 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 Q9UFV3 132 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 IL15RAQ13261 267 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 DAND5Q8N907 189 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 RNF114Q9Y508 228 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 U3KQE9 123 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 CACNA1IQ9P0X4 2223 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 ESPL1Q14674 2120 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 IGF2BP2-AS1Q96M15 143 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 MT-ATP8P03928 68 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 NDUFV3P56181 108 aaKnown RBP7.73□□□□□ -1.17
COL4A6-201ENST00000334504 Q6ZUT4 128 aa7.73□□□□□ -1.17
COL4A6-201ENST00000334504 UBE2BP63146 152 aa7.72□□□□□ -1.17
COL4A6-201ENST00000334504 EP300Q09472 2414 aaPredicted RBP7.72□□□□□ -1.17
COL4A6-201ENST00000334504 GVINP1Q7Z2Y8 2422 aa7.72□□□□□ -1.17
COL4A6-201ENST00000334504 IGHV1-69DA0A0B4J2H0 117 aa7.72□□□□□ -1.17
COL4A6-201ENST00000334504 ALPK2Q86TB3 2170 aa7.72□□□□□ -1.17
COL4A6-201ENST00000334504 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
COL4A6-201ENST00000334504 C5orf38Q86SI9 138 aa7.71□□□□□ -1.17
COL4A6-201ENST00000334504 PLA2G2EQ9NZK7 142 aa7.71□□□□□ -1.17
COL4A6-201ENST00000334504 RALGAPA2Q2PPJ7 1873 aa7.71□□□□□ -1.17
COL4A6-201ENST00000334504 A0A0J9YXV3 536 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 C15orf65H3BRN8 121 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 PRR30Q53SZ7 412 aaPredicted RBP7.71□□□□□ -1.18
COL4A6-201ENST00000334504 ATP5G1P05496 136 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 DIAPH2-AS1Q14236 149 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 LINC01356Q8N9X3 169 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 Q6ZQT7 251 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 ZNF491Q8N8L2 437 aa7.71□□□□□ -1.18
COL4A6-201ENST00000334504 CNOT1A5YKK6 2376 aaKnown RBP7.71□□□□□ -1.18
COL4A6-201ENST00000334504 BPESC1Q9GZL8 116 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
COL4A6-201ENST00000334504 AGPAT4-IT1Q9H0P7 198 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 CACNA1BQ00975 2339 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 PTPRDP23468 1912 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 NCR3O14931 201 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 IGLV2-23P01705 113 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 UBE2E1P51965 193 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 E7EQL1 145 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 PROP1O75360 226 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 IGHV7-4-1A0A0J9YVY3 117 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 LECT2O14960 151 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 WDR90Q96KV7 1748 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 H3BT86 120 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 MSRB1Q9NZV6 116 aa7.7□□□□□ -1.18
COL4A6-201ENST00000334504 SCN5AQ14524 2016 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 FER1L5A0AVI2 2057 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 CACNA1EQ15878 2313 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 C22orf46C9J442 243 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 DKK4Q9UBT3 224 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 GREB1Q4ZG55 1949 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 Q6ZR03 302 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 PI4KAP42356 2102 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 TCL1BO95988 128 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 RBX1P62877 108 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
COL4A6-201ENST00000334504 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
COL4A6-201ENST00000334504 HIST2H2BCQ6DN03 193 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 NOP10Q9NPE3 64 aaKnown RBP7.68□□□□□ -1.18
COL4A6-201ENST00000334504 IGKV1OR2-108A0A075B7D4 117 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 FAM236DA0A1B0GTK5 79 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 TRBV12-3P01733 135 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 FAM236CP0DP71 79 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 Q8TCH9 128 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 E9PLD3 99 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 ADAMTS7Q9UKP4 1686 aa7.68□□□□□ -1.18
COL4A6-201ENST00000334504 A0A0J9YY99 117 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 UQCRQO14949 82 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 BUB3O43684 328 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 NDUFB1O75438 58 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 CD59P13987 128 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 RPL39P62891 51 aaKnown RBP7.67□□□□□ -1.18
COL4A6-201ENST00000334504 GTSF1Q8WW33 167 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 WISP1O95388 367 aa7.67□□□□□ -1.18
COL4A6-201ENST00000334504 LINC00311Q8N616 119 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms