RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 NUP37Q8NFH4 326 aa9.18□□□□□ -0.94
LDLRAD3-201ENST00000315571 Q6ZSR3 168 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 C1orf159Q96HA4 380 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 PLNP26678 52 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 DOPEY2Q9Y3R5 2298 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 RELNP78509 3460 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 TRACP01848 142 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 COX6CP09669 75 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 DEFB108BQ8NET1 73 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 PRSS22Q9GZN4 317 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 DOPEY1Q5JWR5 2465 aa9.17□□□□□ -0.94
LDLRAD3-201ENST00000315571 TRAV41A0A0B4J266 112 aa9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 RS1O15537 224 aa9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 KLHL30-AS1Q8NEE0 82 aa9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 SPTAN1Q13813 2472 aaKnown RBP9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 GATA1P15976 413 aaPredicted RBP9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 ATXN8Q156A1 80 aa9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 DEFB104AQ8WTQ1 72 aa9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 RASL10AQ92737 203 aa9.16□□□□□ -0.94
LDLRAD3-201ENST00000315571 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 IQCF6A8MYZ5 107 aa9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 SHISA9B4DS77 424 aa9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 C19orf71A6NCJ1 209 aa9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 PRSS46E5RG02 174 aa9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 USP9XQ93008 2570 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-201ENST00000315571 RBAKDNA6NC62 111 aa9.15□□□□□ -0.95
LDLRAD3-201ENST00000315571 H7C1H1 209 aa9.15□□□□□ -0.95
LDLRAD3-201ENST00000315571 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.95
LDLRAD3-201ENST00000315571 ZNF714Q96N38 554 aa9.15□□□□□ -0.95
LDLRAD3-201ENST00000315571 FLNCQ14315 2725 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 C3orf22Q8N5N4 141 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 E7EQL1 145 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 MSMPQ1L6U9 139 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 PRDX2P32119 198 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 DYNLRB1Q9NP97 96 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 METRNQ9UJH8 293 aa9.14□□□□□ -0.95
LDLRAD3-201ENST00000315571 COX6B1P14854 86 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 CRIP2P52943 208 aaPredicted RBP9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 ZNF672Q499Z4 452 aaPredicted RBP9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 C10orf55Q5SWW7 151 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 FOXA2Q9Y261 457 aaPredicted RBP9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 AKAP6Q13023 2319 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 NAV3Q8IVL0 2385 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 IGHV3OR15-7A0A075B7D8 119 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 hADV29S1A0JD25 119 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 UQCRQO14949 82 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 LAGE3Q14657 143 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 IGLV3-9A0A075B6K5 115 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 WI2-2373I1.2A0A1W2PRP0 233 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 LGALS1P09382 135 aaKnown RBP9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 Q6Q795 121 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 PATE2Q6UY27 113 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
LDLRAD3-201ENST00000315571 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 SPRY3O43610 288 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 RPUSD1Q9UJJ7 312 aaKnown RBP9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 UBR5O95071 2799 aaPredicted RBP9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 ADGRG4Q8IZF6 3080 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 TIMM23O14925 209 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 RNASE2P10153 161 aaKnown RBP9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 LOXP28300 417 aaPredicted RBP9.12□□□□□ -0.95
LDLRAD3-201ENST00000315571 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 F8VRH5 84 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 UPK2O00526 184 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 MRPS12O15235 138 aaKnown RBP9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 LINC01620Q4KN68 170 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 SPANXN1Q5VSR9 72 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 CXXC4Q9H2H0 198 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 SIGLEC9Q9Y336 463 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 SAA2P0DJI9 122 aaPredicted RBP9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 ZNRF1Q8ND25 227 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 MRPL20Q9BYC9 149 aaKnown RBP9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 TMEM14BQ9NUH8 114 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
LDLRAD3-201ENST00000315571 ABCA4P78363 2273 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 IGHV3-64A0A075B6Q5 118 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 M0R2P5 195 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 SAA1P0DJI8 122 aaPredicted RBP9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 LINC01587Q99440 93 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 C7orf69Q9H7B7 122 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 TMEM219Q86XT9 240 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 SH2D1AO60880 128 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 IGKV1-16P04430 117 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 TNFAIP6P98066 277 aaPredicted RBP9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 DSCR8Q96T75 97 aa9.1□□□□□ -0.95
LDLRAD3-201ENST00000315571 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms