RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GAGE2BQ13066 116 aa12.52□□□□□ -0.41
USP42-201ENST00000306177 GAGE2EQ4V326 116 aa12.52□□□□□ -0.41
USP42-201ENST00000306177 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.41
USP42-201ENST00000306177 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
USP42-201ENST00000306177 IGLC2P0DOY2 106 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
USP42-201ENST00000306177 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 Q71RC1 249 aaPredicted RBP12.51□□□□□ -0.41
USP42-201ENST00000306177 PRO3102Q9H379 93 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 I3L2K1 104 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
USP42-201ENST00000306177 INS-IGF2F8WCM5 200 aa12.5□□□□□ -0.41
USP42-201ENST00000306177 OBSL1O75147 1896 aa12.5□□□□□ -0.41
USP42-201ENST00000306177 MRPL35Q9NZE8 188 aaKnown RBP12.5□□□□□ -0.41
USP42-201ENST00000306177 TSSC4Q9Y5U2 329 aaPredicted RBP12.5□□□□□ -0.41
USP42-201ENST00000306177 VWC2LB2RUY7 222 aa12.5□□□□□ -0.41
USP42-201ENST00000306177 F6UB75 175 aa12.5□□□□□ -0.41
USP42-201ENST00000306177 F8WEM9 126 aa12.5□□□□□ -0.41
USP42-201ENST00000306177 F8VRH5 84 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 WISP2O76076 250 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 EGR2P11161 476 aaPredicted RBP12.49□□□□□ -0.41
USP42-201ENST00000306177 DEFB113Q30KQ7 82 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 WIPF2Q8TF74 440 aaPredicted RBP12.49□□□□□ -0.41
USP42-201ENST00000306177 IGHV4-30-2A0A087WSY4 118 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 C9JAW5 83 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 GAGE6Q13070 117 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 K7EIM0 57 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 COX8AP10176 69 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 IGLV11-55A0A075B6I3 123 aa12.49□□□□□ -0.41
USP42-201ENST00000306177 IGHV4-38-2P0DP08 117 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 IGLL1P15814 213 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 FOXE3Q13461 319 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 IGFBPL1Q8WX77 278 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 CFHR4Q92496 578 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 RITA1Q96K30 269 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 OTOGLQ3ZCN5 2332 aa12.48□□□□□ -0.41
USP42-201ENST00000306177 GP9P14770 177 aa12.47□□□□□ -0.41
USP42-201ENST00000306177 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
USP42-201ENST00000306177 PRB1P04280 392 aa12.47□□□□□ -0.41
USP42-201ENST00000306177 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
USP42-201ENST00000306177 GNRH2O43555 120 aa12.47□□□□□ -0.41
USP42-201ENST00000306177 PFN2P35080 140 aa12.47□□□□□ -0.41
USP42-201ENST00000306177 ADAMTSL5Q6ZMM2 481 aa12.47□□□□□ -0.41
USP42-201ENST00000306177 HIST1H4AP62805 103 aaKnown RBP12.46□□□□□ -0.41
USP42-201ENST00000306177 OCIAD2Q56VL3 154 aa12.46□□□□□ -0.41
USP42-201ENST00000306177 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
USP42-201ENST00000306177 IGKV1-17P01599 117 aa12.46□□□□□ -0.41
USP42-201ENST00000306177 CCL24O00175 119 aa12.46□□□□□ -0.41
USP42-201ENST00000306177 C10orf105Q8TEF2 133 aa12.46□□□□□ -0.41
USP42-201ENST00000306177 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.41
USP42-201ENST00000306177 SNHG12Q9BXW3 62 aa12.46□□□□□ -0.42
USP42-201ENST00000306177 ZNF106Q9H2Y7 1883 aaKnown RBP12.46□□□□□ -0.42
USP42-201ENST00000306177 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
USP42-201ENST00000306177 TRBV20-1A0A075B6N2 111 aa12.45□□□□□ -0.42
USP42-201ENST00000306177 CTSGP08311 255 aa12.45□□□□□ -0.42
USP42-201ENST00000306177 HERVK_113P63121 156 aa12.45□□□□□ -0.42
USP42-201ENST00000306177 K7EMI3 77 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 DEFB136Q30KP8 78 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 NCOA6Q14686 2063 aaPredicted RBP12.44□□□□□ -0.42
USP42-201ENST00000306177 DAZAP2Q15038 168 aaPredicted RBP12.44□□□□□ -0.42
USP42-201ENST00000306177 PATE2Q6UY27 113 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 PCDH15Q96QU1 1955 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 C9orf118A6NHY6 69 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 BLCAPP62952 87 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 RHOHQ15669 191 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 Q8N9W7 124 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 Q8NA96 180 aa12.44□□□□□ -0.42
USP42-201ENST00000306177 AJUBAQ96IF1 538 aa12.43□□□□□ -0.42
USP42-201ENST00000306177 MSMPQ1L6U9 139 aa12.43□□□□□ -0.42
USP42-201ENST00000306177 GAGE2AQ6NT46 116 aa12.43□□□□□ -0.42
USP42-201ENST00000306177 IGF2BP2-AS1Q96M15 143 aa12.43□□□□□ -0.42
USP42-201ENST00000306177 J3QQQ9 107 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 U3KQE9 123 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 C5orf56Q8N8D9 126 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 NOP10Q9NPE3 64 aaKnown RBP12.42□□□□□ -0.42
USP42-201ENST00000306177 TAL2Q16559 108 aa12.42□□□□□ -0.42
USP42-201ENST00000306177 CDK2AP2O75956 126 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 MORN5Q5VZ52 161 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 DENND4AQ7Z401 1863 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 TMEM131Q92545 1883 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 SLURP1P55000 103 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 ZNF747Q9BV97 191 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 BUB3O43684 328 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 EML6Q6ZMW3 1958 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
USP42-201ENST00000306177 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
USP42-201ENST00000306177 FBXL19-AS1Q494R0 122 aa12.4□□□□□ -0.42
USP42-201ENST00000306177 ODF3L1Q8IXM7 274 aa12.4□□□□□ -0.42
USP42-201ENST00000306177 NKAPP1Q8N9T2 125 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms