RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 KLF2Q9Y5W3 355 aaPredicted RBP16.52■□□□□ 0.24
LETM1-201ENST00000302787 ELANEP08246 267 aa16.52■□□□□ 0.24
LETM1-201ENST00000302787 ABCA1O95477 2261 aa16.52■□□□□ 0.23
LETM1-201ENST00000302787 DAD1P61803 113 aa16.52■□□□□ 0.23
LETM1-201ENST00000302787 DEFB121Q5J5C9 76 aa16.52■□□□□ 0.23
LETM1-201ENST00000302787 PATE2Q6UY27 113 aa16.52■□□□□ 0.23
LETM1-201ENST00000302787 ATP6V0BQ99437 205 aa16.52■□□□□ 0.23
LETM1-201ENST00000302787 DKK4Q9UBT3 224 aa16.52■□□□□ 0.23
LETM1-201ENST00000302787 F5H768 121 aa16.51■□□□□ 0.23
LETM1-201ENST00000302787 ZNF493Q6ZR52 646 aa16.51■□□□□ 0.23
LETM1-201ENST00000302787 IGF2BP2-AS1Q96M15 143 aa16.51■□□□□ 0.23
LETM1-201ENST00000302787 NUPR1O60356 82 aa16.51■□□□□ 0.23
LETM1-201ENST00000302787 INAFM2P0DMQ5 153 aa16.51■□□□□ 0.23
LETM1-201ENST00000302787 NPBQ8NG41 125 aa16.5■□□□□ 0.23
LETM1-201ENST00000302787 NBASA2RRP1 2371 aa16.5■□□□□ 0.23
LETM1-201ENST00000302787 F8WEM9 126 aa16.5■□□□□ 0.23
LETM1-201ENST00000302787 K7EIM0 57 aa16.5■□□□□ 0.23
LETM1-201ENST00000302787 PRSS29PA6NIE9 313 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 SOCS3O14543 225 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 LENEPQ9Y5L5 61 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 H3BMG7 143 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 COL4A3Q01955 1670 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 ARFGEF3Q5TH69 2177 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 GATA1P15976 413 aaPredicted RBP16.49■□□□□ 0.23
LETM1-201ENST00000302787 RNASE13Q5GAN3 156 aaKnown RBP16.49■□□□□ 0.23
LETM1-201ENST00000302787 FOXI2Q6ZQN5 318 aa16.49■□□□□ 0.23
LETM1-201ENST00000302787 PSCAO43653 123 aa16.48■□□□□ 0.23
LETM1-201ENST00000302787 C12orf74Q32Q52 190 aa16.48■□□□□ 0.23
LETM1-201ENST00000302787 CENPVL3A0A0U1RRI6 287 aa16.48■□□□□ 0.23
LETM1-201ENST00000302787 IGKV1-17P01599 117 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 HERVK_113P63121 156 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 PCP2Q8IVA1 136 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 ZNF561-AS1K7EIQ3 104 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 IGLV2-14P01704 120 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 KMT2EQ8IZD2 1858 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 IGHV7-81A0A0B4J1V7 117 aa16.47■□□□□ 0.23
LETM1-201ENST00000302787 DOCK10Q96BY6 2186 aa16.46■□□□□ 0.23
LETM1-201ENST00000302787 K7EMI3 77 aa16.46■□□□□ 0.23
LETM1-201ENST00000302787 CACNA1HO95180 2353 aa16.46■□□□□ 0.23
LETM1-201ENST00000302787 IGLV11-55A0A075B6I3 123 aa16.46■□□□□ 0.23
LETM1-201ENST00000302787 SPRY2O43597 315 aa16.46■□□□□ 0.22
LETM1-201ENST00000302787 AMTNQ6UX39 209 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 SPTAN1Q13813 2472 aaKnown RBP16.45■□□□□ 0.22
LETM1-201ENST00000302787 NXPH4O95158 308 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 RHOHQ15669 191 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 DEFB112Q30KQ8 113 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 Q6ZVH6 145 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 FAM167A-AS1Q96KT0 104 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 NBL1P41271 181 aa16.45■□□□□ 0.22
LETM1-201ENST00000302787 IGHV4-59P01825 116 aa16.44■□□□□ 0.22
LETM1-201ENST00000302787 LINC00173Q6ZV60 143 aa16.44■□□□□ 0.22
LETM1-201ENST00000302787 MALRD1Q5VYJ5 2156 aa16.44■□□□□ 0.22
LETM1-201ENST00000302787 CTSGP08311 255 aa16.43■□□□□ 0.22
LETM1-201ENST00000302787 HOXD3P31249 432 aaPredicted RBP16.43■□□□□ 0.22
LETM1-201ENST00000302787 ABCA4P78363 2273 aa16.43■□□□□ 0.22
LETM1-201ENST00000302787 GTF3C1Q12789 2109 aa16.42■□□□□ 0.22
LETM1-201ENST00000302787 CARD19Q96LW7 228 aa16.42■□□□□ 0.22
LETM1-201ENST00000302787 KIF26AQ9ULI4 1882 aaPredicted RBP16.42■□□□□ 0.22
LETM1-201ENST00000302787 IGLV2-23P01705 113 aa16.42■□□□□ 0.22
LETM1-201ENST00000302787 VPREB3Q9UKI3 123 aa16.42■□□□□ 0.22
LETM1-201ENST00000302787 DEFB125Q8N687 156 aa16.42■□□□□ 0.22
LETM1-201ENST00000302787 PCNX1Q96RV3 2341 aa16.42■□□□□ 0.22
LETM1-201ENST00000302787 BOD1L2Q8IYS8 172 aa16.41■□□□□ 0.22
LETM1-201ENST00000302787 TDRG1Q3Y452 100 aa16.41■□□□□ 0.22
LETM1-201ENST00000302787 GAGE12HA6NDE8 117 aa16.41■□□□□ 0.22
LETM1-201ENST00000302787 MSRB1Q9NZV6 116 aa16.41■□□□□ 0.22
LETM1-201ENST00000302787 UTF1Q5T230 341 aa16.41■□□□□ 0.22
LETM1-201ENST00000302787 RPL39LQ96EH5 51 aaKnown RBP16.41■□□□□ 0.22
LETM1-201ENST00000302787 TRAV13-2A0A0B4J235 113 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 C3orf56Q8N813 242 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 SHANK1Q9Y566 2161 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 GTSF1Q8WW33 167 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 C9orf153Q5TBE3 101 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 C11orf1Q9H5F2 150 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 U3KQE9 123 aa16.4■□□□□ 0.22
LETM1-201ENST00000302787 LINC01545Q5VT33 79 aa16.39■□□□□ 0.22
LETM1-201ENST00000302787 IGF2-ASQ6U949 168 aa16.39■□□□□ 0.22
LETM1-201ENST00000302787 ODF3L1Q8IXM7 274 aa16.39■□□□□ 0.22
LETM1-201ENST00000302787 EML6Q6ZMW3 1958 aa16.39■□□□□ 0.22
LETM1-201ENST00000302787 APOC4P55056 127 aa16.39■□□□□ 0.21
LETM1-201ENST00000302787 CDK2AP2O75956 126 aa16.39■□□□□ 0.21
LETM1-201ENST00000302787 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.39■□□□□ 0.21
LETM1-201ENST00000302787 IGKV2-29A2NJV5 120 aaPredicted RBP16.39■□□□□ 0.21
LETM1-201ENST00000302787 CCL25O15444 150 aa16.39■□□□□ 0.21
LETM1-201ENST00000302787 IGKV1OR2-108A0A075B7D4 117 aa16.38■□□□□ 0.21
LETM1-201ENST00000302787 A0A096LPF7 62 aa16.38■□□□□ 0.21
LETM1-201ENST00000302787 SUMO4Q6EEV6 95 aa16.38■□□□□ 0.21
LETM1-201ENST00000302787 WI2-2373I1.2A0A1W2PRP0 233 aa16.38■□□□□ 0.21
LETM1-201ENST00000302787 TEX22C9J3V5 150 aa16.38■□□□□ 0.21
LETM1-201ENST00000302787 SCRT2Q9NQ03 307 aa16.38■□□□□ 0.21
LETM1-201ENST00000302787 IGHV4-61A0A0C4DH41 118 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 BUB3O43684 328 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 CFC1BP0CG36 223 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 CFC1P0CG37 223 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 SEM1Q6ZVN7 128 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 NOP10Q9NPE3 64 aaKnown RBP16.37■□□□□ 0.21
LETM1-201ENST00000302787 IGHV4-38-2P0DP08 117 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 ANKRD39Q53RE8 183 aa16.37■□□□□ 0.21
LETM1-201ENST00000302787 AJUBAQ96IF1 538 aa16.36■□□□□ 0.21
LETM1-201ENST00000302787 SPANXA1Q9NS26 97 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms