RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RNF182Q8N6D2 247 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 SPTBN1Q01082 2364 aaKnown RBP8.37□□□□□ -1.07
ZNF558-201ENST00000301475 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 PSMB2P49721 201 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 NDPQ00604 133 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 PLEKHB2Q96CS7 222 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 LOC107984156A0A0G2JMH3 177 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 LY6LH3BQJ8 138 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 UBE2D1P51668 147 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 ARL17AQ8IVW1 177 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 C21orf62Q9NYP8 219 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 NBR2O15453 112 aa8.36□□□□□ -1.07
ZNF558-201ENST00000301475 RNASE6Q93091 150 aaKnown RBP8.36□□□□□ -1.07
ZNF558-201ENST00000301475 PRADC1Q9BSG0 188 aa8.36□□□□□ -1.07
ZNF558-201ENST00000301475 UBE2D3P61077 147 aa8.36□□□□□ -1.07
ZNF558-201ENST00000301475 UBE2D2P62837 147 aa8.36□□□□□ -1.07
ZNF558-201ENST00000301475 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
ZNF558-201ENST00000301475 RAXQ9Y2V3 346 aa8.36□□□□□ -1.07
ZNF558-201ENST00000301475 RNF5Q99942 180 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 RALYQ9UKM9 306 aaKnown RBP8.35□□□□□ -1.07
ZNF558-201ENST00000301475 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 CD7P09564 240 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 CTSGP08311 255 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 TEN1Q86WV5 123 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 PPDPFLQ8WWR9 84 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 RASL10AQ92737 203 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 VKORC1Q9BQB6 163 aa8.35□□□□□ -1.07
ZNF558-201ENST00000301475 ABCA4P78363 2273 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 COX6B1P14854 86 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 SCGB3A1Q96QR1 104 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 KIR2DL4Q99706 377 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 DYNLRB1Q9NP97 96 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 TCL1BO95988 128 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 AGPAT4-IT1Q9H0P7 198 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 ONECUT1Q9UBC0 465 aa8.34□□□□□ -1.07
ZNF558-201ENST00000301475 TGFAP01135 160 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 SLC25A16P16260 332 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 C5orf64Q2M2E5 130 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 SCGB1D4Q6XE38 83 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 SS18L2Q9UHA2 77 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 ACACBO00763 2458 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 A6NJY4 79 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 KLHL30-AS1Q8NEE0 82 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
ZNF558-201ENST00000301475 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV3-66A0A0C4DH42 116 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 SPRY2O43597 315 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 SPANXN1Q5VSR9 72 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 H3BVH4 76 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
ZNF558-201ENST00000301475 NPBQ8NG41 125 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 ZFYVE26Q68DK2 2539 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 HES1Q14469 280 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 NDUFA11Q86Y39 141 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 OR11H6Q8NGC7 330 aa8.32□□□□□ -1.08
ZNF558-201ENST00000301475 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV3OR16-13A0A075B7E8 117 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV3-74A0A0B4J1X5 117 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 ANAPC13Q9BS18 74 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV4-4A0A075B6R2 117 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 RBAKDNA6NC62 111 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 E7EQL1 145 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
ZNF558-201ENST00000301475 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
ZNF558-201ENST00000301475 AKAP6Q13023 2319 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 A0A0G2JNJ9 132 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 BUB3O43684 328 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 ZNF688P0C7X2 276 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 PRR9Q5T870 116 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 Q9UFV3 132 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 ITPR1Q14643 2758 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 MED13LQ71F56 2210 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 FAM90A27PA6NNH2 459 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 Q6ZS46 218 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 SLC50A1Q9BRV3 221 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 CACNA1AO00555 2505 aa8.3□□□□□ -1.08
ZNF558-201ENST00000301475 A0A0J9YY99 117 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
ZNF558-201ENST00000301475 EMP1P54849 157 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 DPM3Q9P2X0 92 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 A8MWV9 139 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 CITED1Q99966 193 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 PKD1L2Q7Z442 2459 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV3-49A0A0A0MS15 119 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms