RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 SPINK8P0C7L1 97 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 GTSF1Q8WW33 167 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 BOD1L2Q8IYS8 172 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 PCDH15Q96QU1 1955 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 KNCNA6PVL3 124 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 NBL1P41271 181 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 Q5PR19 223 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 IGHV7-81A0A0B4J1V7 117 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 BRWD1-AS2P59051 145 aa15.13■□□□□ 0.01
TSR1-201ENST00000301364 PROP1O75360 226 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 MSMPQ1L6U9 139 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 CENPVL3A0A0U1RRI6 287 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 CTSGP08311 255 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 LINC01619G3V211 115 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 C6orf226Q5I0X4 101 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 PCNX3Q9H6A9 2034 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 CGB3P0DN86 165 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 CGB7P0DN87 165 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 PPDPFLQ8WWR9 84 aa15.12■□□□□ 0.01
TSR1-201ENST00000301364 TRAV8-3A0A0A6YYJ7 113 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 TEX22C9J3V5 150 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 LGALS1P09382 135 aaKnown RBP15.11■□□□□ 0.01
TSR1-201ENST00000301364 TCTEX1D4Q5JR98 221 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 J3QLI3 93 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 S100A7L2Q5SY68 101 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 TRBV6-1A0A0K0K1D8 114 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 CRYGCP07315 174 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 FOXE3Q13461 319 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 ATP6V0BQ99437 205 aa15.11■□□□□ 0.01
TSR1-201ENST00000301364 LINC00173Q6ZV60 143 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 GATD1Q8NB37 220 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 PRO1854Q9UHT4 67 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 E7EUB6 86 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 WI2-2373I1.2A0A1W2PRP0 233 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 PCP2Q8IVA1 136 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 LINC00574Q9H8X3 128 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 TRAV12-2A0A075B6T6 113 aa15.1■□□□□ 0.01
TSR1-201ENST00000301364 RPL35AP18077 110 aaKnown RBP15.1■□□□□ 0.01
TSR1-201ENST00000301364 MRPL36Q9P0J6 103 aaKnown RBP15.1■□□□□ 0.01
TSR1-201ENST00000301364 J3QQQ9 107 aa15.09■□□□□ 0.01
TSR1-201ENST00000301364 GRNP28799 593 aaKnown RBP15.09■□□□□ 0.01
TSR1-201ENST00000301364 ZFHX2Q9C0A1 2572 aaPredicted RBP15.09■□□□□ 0.01
TSR1-201ENST00000301364 ELANEP08246 267 aa15.09■□□□□ 0.01
TSR1-201ENST00000301364 PRSS29PA6NIE9 313 aa15.09■□□□□ 0.01
TSR1-201ENST00000301364 C12orf74Q32Q52 190 aa15.09■□□□□ 0.01
TSR1-201ENST00000301364 RNF223E7ERA6 249 aa15.09■□□□□ 0.01
TSR1-201ENST00000301364 SCRT2Q9NQ03 307 aa15.09■□□□□ 0.01
TSR1-201ENST00000301364 BUB3O43684 328 aa15.08■□□□□ 0.01
TSR1-201ENST00000301364 XCL2Q9UBD3 114 aa15.08■□□□□ 0.01
TSR1-201ENST00000301364 TSSC4Q9Y5U2 329 aaPredicted RBP15.08■□□□□ 0.01
TSR1-201ENST00000301364 ZNF503Q96F45 646 aa15.08■□□□□ 0
TSR1-201ENST00000301364 FRMD6-AS1P0C7T7 363 aa15.08■□□□□ 0
TSR1-201ENST00000301364 JPT2Q9H910 190 aa15.08■□□□□ 0
TSR1-201ENST00000301364 NDUFA12Q9UI09 145 aa15.08■□□□□ 0
TSR1-201ENST00000301364 NCKAP5O14513 1909 aa15.07■□□□□ 0
TSR1-201ENST00000301364 Q6ZVH6 145 aa15.07■□□□□ 0
TSR1-201ENST00000301364 K7ERJ3 54 aa15.07■□□□□ 0
TSR1-201ENST00000301364 CCL25O15444 150 aa15.07■□□□□ 0
TSR1-201ENST00000301364 EIF4EBP1Q13541 118 aaPredicted RBP15.07■□□□□ 0
TSR1-201ENST00000301364 ANKRD39Q53RE8 183 aa15.07■□□□□ 0
TSR1-201ENST00000301364 RHOHQ15669 191 aa15.06■□□□□ 0
TSR1-201ENST00000301364 C19orf71A6NCJ1 209 aa15.06■□□□□ 0
TSR1-201ENST00000301364 H3BMG7 143 aa15.06■□□□□ 0
TSR1-201ENST00000301364 GATA1P15976 413 aaPredicted RBP15.06■□□□□ 0
TSR1-201ENST00000301364 TRBV25-1A0A075B6N4 114 aa15.05■□□□□ 0
TSR1-201ENST00000301364 GNRH2O43555 120 aa15.05■□□□□ 0
TSR1-201ENST00000301364 FGF6P10767 208 aa15.05■□□□□ -0
TSR1-201ENST00000301364 YPEL4Q96NS1 127 aa15.05■□□□□ -0
TSR1-201ENST00000301364 SS18Q15532 418 aa15.05■□□□□ -0
TSR1-201ENST00000301364 MSRB1Q9NZV6 116 aa15.05■□□□□ -0
TSR1-201ENST00000301364 F6UB75 175 aa15.04■□□□□ -0
TSR1-201ENST00000301364 H3BMM0 161 aa15.04■□□□□ -0
TSR1-201ENST00000301364 Q8N9W7 124 aa15.04■□□□□ -0
TSR1-201ENST00000301364 UBE2WQ96B02 151 aa15.04■□□□□ -0
TSR1-201ENST00000301364 MUC22E2RYF6 1773 aaPredicted RBP15.04■□□□□ -0
TSR1-201ENST00000301364 TECTAO75443 2155 aa15.04■□□□□ -0
TSR1-201ENST00000301364 ZNF625Q96I27 306 aaPredicted RBP15.04■□□□□ -0
TSR1-201ENST00000301364 IGKV1D-37A0A075B6S9 117 aa15.04■□□□□ -0
TSR1-201ENST00000301364 TCF15Q12870 199 aa15.04■□□□□ -0
TSR1-201ENST00000301364 C11orf68Q9H3H3 251 aaKnown RBP15.04■□□□□ -0
TSR1-201ENST00000301364 FOXI2Q6ZQN5 318 aa15.03■□□□□ -0
TSR1-201ENST00000301364 ZNF48Q96MX3 618 aaPredicted RBP15.03■□□□□ -0
TSR1-201ENST00000301364 GAGE12JA6NER3 117 aa15.03■□□□□ -0
TSR1-201ENST00000301364 WISP2O76076 250 aa15.03■□□□□ -0
TSR1-201ENST00000301364 AZU1P20160 251 aa15.03■□□□□ -0
TSR1-201ENST00000301364 GAGE4Q13068 117 aa15.03■□□□□ -0
TSR1-201ENST00000301364 GAGE5Q13069 117 aa15.03■□□□□ -0
TSR1-201ENST00000301364 SP5Q6BEB4 398 aaPredicted RBP15.03■□□□□ -0
TSR1-201ENST00000301364 IGHV3-16A0A0C4DH30 117 aa15.03■□□□□ -0
TSR1-201ENST00000301364 CTRLP40313 264 aa15.03■□□□□ -0
TSR1-201ENST00000301364 ANKHD1Q8IWZ3 2542 aaKnown RBP15.03■□□□□ -0
TSR1-201ENST00000301364 C10orf142B7Z368 130 aa15.02■□□□□ -0
TSR1-201ENST00000301364 SPANXA1Q9NS26 97 aa15.02■□□□□ -0
TSR1-201ENST00000301364 ARHGAP21Q5T5U3 1957 aa15.02■□□□□ -0
TSR1-201ENST00000301364 SRCAPQ6ZRS2 3230 aa15.02■□□□□ -0
TSR1-201ENST00000301364 IGLV2-8P01709 118 aa15.02■□□□□ -0
TSR1-201ENST00000301364 ADAMTS9Q9P2N4 1935 aa15.02□□□□□ -0.01
TSR1-201ENST00000301364 ZNRF2Q8NHG8 242 aa15.02□□□□□ -0.01
TSR1-201ENST00000301364 DNAJC30Q96LL9 226 aa15.02□□□□□ -0.01
TSR1-201ENST00000301364 C16orf54Q6UWD8 224 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms