RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 C14orf178Q8N769 122 aaPredicted RBP11.31□□□□□ -0.6
COL6A2-201ENST00000300527 KAAG1Q9UBP8 84 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 F8VRH5 84 aa11.3□□□□□ -0.6
COL6A2-201ENST00000300527 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
COL6A2-201ENST00000300527 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
COL6A2-201ENST00000300527 PLA2G2CQ5R387 149 aa11.3□□□□□ -0.6
COL6A2-201ENST00000300527 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
COL6A2-201ENST00000300527 C15orf32Q32M92 178 aa11.3□□□□□ -0.6
COL6A2-201ENST00000300527 ANXA2RQ3ZCQ2 193 aa11.3□□□□□ -0.6
COL6A2-201ENST00000300527 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
COL6A2-201ENST00000300527 NFE4Q86UQ8 179 aa11.3□□□□□ -0.6
COL6A2-201ENST00000300527 DEFB123Q8N688 67 aa11.3□□□□□ -0.6
COL6A2-201ENST00000300527 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
COL6A2-201ENST00000300527 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 IGF1P05019 195 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 PRO0461Q9UI25 63 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 TLN1Q9Y490 2541 aaKnown RBP11.29□□□□□ -0.6
COL6A2-201ENST00000300527 OTOGLQ3ZCN5 2332 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 RPL11P62913 178 aaKnown RBP11.29□□□□□ -0.6
COL6A2-201ENST00000300527 NRACQ8N912 160 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 PIFOQ8TCI5 191 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
COL6A2-201ENST00000300527 COL6A6A6NMZ7 2263 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
COL6A2-201ENST00000300527 GATA3P23771 443 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 XGP55808 180 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 LINC00527Q9UJ94 153 aa11.28□□□□□ -0.6
COL6A2-201ENST00000300527 PRTN3P24158 256 aa11.27□□□□□ -0.61
COL6A2-201ENST00000300527 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
COL6A2-201ENST00000300527 TAL2Q16559 108 aa11.27□□□□□ -0.61
COL6A2-201ENST00000300527 CD3EP07766 207 aa11.27□□□□□ -0.61
COL6A2-201ENST00000300527 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.61
COL6A2-201ENST00000300527 C16orf92Q96LL3 132 aa11.27□□□□□ -0.61
COL6A2-201ENST00000300527 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
COL6A2-201ENST00000300527 PRSS29PA6NIE9 313 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 Q6ZS92 163 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 RNF183Q96D59 192 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 A6NJY4 79 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 SS18L2Q9UHA2 77 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 TSPAN13O95857 204 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 PRR30Q53SZ7 412 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-201ENST00000300527 TMEM170BQ5T4T1 132 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
COL6A2-201ENST00000300527 IGHV3-64A0A075B6Q5 118 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 G3V318 75 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 FHL3Q13643 280 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
COL6A2-201ENST00000300527 CDIP1Q9H305 208 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 PHLDA3Q9Y5J5 127 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 SUMO2P61956 95 aaKnown RBP11.25□□□□□ -0.61
COL6A2-201ENST00000300527 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
COL6A2-201ENST00000300527 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 AKAP13Q12802 2813 aa11.25□□□□□ -0.61
COL6A2-201ENST00000300527 RELNP78509 3460 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 LY6LH3BQJ8 138 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 TMEM95Q3KNT9 176 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 CFAP126Q5VTH2 177 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 RNF5Q99942 180 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 Q6ZUT4 128 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 ANAPC13Q9BS18 74 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 CNFNQ9BYD5 112 aa11.24□□□□□ -0.61
COL6A2-201ENST00000300527 F5H697 171 aa11.23□□□□□ -0.61
COL6A2-201ENST00000300527 PRR9Q5T870 116 aa11.23□□□□□ -0.61
COL6A2-201ENST00000300527 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
COL6A2-201ENST00000300527 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
COL6A2-201ENST00000300527 BUB3O43684 328 aa11.23□□□□□ -0.61
COL6A2-201ENST00000300527 Q1RN00 199 aa11.23□□□□□ -0.61
COL6A2-201ENST00000300527 ORMDL2Q53FV1 153 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 B9A039 149 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 TCL1BO95988 128 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
COL6A2-201ENST00000300527 C1orf122Q6ZSJ8 110 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 CEP295Q9C0D2 2601 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 MSRB2Q9Y3D2 182 aa11.22□□□□□ -0.61
COL6A2-201ENST00000300527 A8MWV9 139 aa11.21□□□□□ -0.61
COL6A2-201ENST00000300527 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
COL6A2-201ENST00000300527 RASL10AQ92737 203 aa11.21□□□□□ -0.61
COL6A2-201ENST00000300527 METTL26Q96S19 204 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 CREBBPQ92793 2442 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 F6UB75 175 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 Q6ZS46 218 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 VMO1Q7Z5L0 202 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 PPDPFLQ8WWR9 84 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 CARD19Q96LW7 228 aa11.21□□□□□ -0.62
COL6A2-201ENST00000300527 C11orf86A6NJI1 115 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 GNRH2O43555 120 aa11.2□□□□□ -0.62
COL6A2-201ENST00000300527 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
COL6A2-201ENST00000300527 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms