RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DKK2Q9UBU2 259 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 PEF1Q9UBV8 284 aaKnown RBP10.37□□□□□ -0.75
CDH8-201ENST00000299345 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 TMEM95Q3KNT9 176 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
CDH8-201ENST00000299345 SPRY2O43597 315 aa10.36□□□□□ -0.75
CDH8-201ENST00000299345 SMIM17P0DL12 118 aa10.36□□□□□ -0.75
CDH8-201ENST00000299345 GATA3P23771 443 aa10.36□□□□□ -0.75
CDH8-201ENST00000299345 LAGE3Q14657 143 aa10.36□□□□□ -0.75
CDH8-201ENST00000299345 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
CDH8-201ENST00000299345 SRSF1Q07955 248 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDH8-201ENST00000299345 UBE2V1Q13404 147 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 ANXA2RQ3ZCQ2 193 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 IGHV4-59P01825 116 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 COX6B1P14854 86 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 PRR9Q5T870 116 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
CDH8-201ENST00000299345 TMEM8BA6NDV4 472 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 SLC25A16P16260 332 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 MAPK1IP1LQ8NDC0 245 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 TMEM160Q9NX00 188 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 SMPXQ9UHP9 88 aa10.35□□□□□ -0.75
CDH8-201ENST00000299345 AVPP01185 164 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 FAM159AQ6UWV7 190 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 WFDC12Q8WWY7 111 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 DPF1Q92782 380 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 A6NDN8 102 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 DEFB112Q30KQ8 113 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 ABCA2Q9BZC7 2435 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 IGKCP01834 107 aa10.34□□□□□ -0.75
CDH8-201ENST00000299345 ZFAND2AQ8N6M9 145 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 OR9G4Q8NGQ1 327 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 MRAP2Q96G30 205 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 USP9XQ93008 2570 aaPredicted RBP10.33□□□□□ -0.76
CDH8-201ENST00000299345 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 CD5LO43866 347 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 DPM2O94777 84 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 ZNF575Q86XF7 245 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 PSMG4Q5JS54 123 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 COL12A1Q99715 3063 aa10.33□□□□□ -0.76
CDH8-201ENST00000299345 F5H697 171 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 CCL25O15444 150 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 SEC11AP67812 179 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 ITPR1Q14643 2758 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
CDH8-201ENST00000299345 GNRH2O43555 120 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 SAMD13Q5VXD3 122 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 GPHB5Q86YW7 130 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 PCP2Q8IVA1 136 aa10.32□□□□□ -0.76
CDH8-201ENST00000299345 ZNF688P0C7X2 276 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 CSMD1Q96PZ7 3565 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 HSD52Q0P140 79 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 POLQO75417 2590 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 TAX1BP3O14907 124 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 BRI3O95415 125 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 SNRPD3P62318 126 aaKnown RBP10.31□□□□□ -0.76
CDH8-201ENST00000299345 BOD1L2Q8IYS8 172 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
CDH8-201ENST00000299345 LRRK2Q5S007 2527 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
CDH8-201ENST00000299345 ODF1Q14990 250 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 ORMDL2Q53FV1 153 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 C2orf91Q6ZV80 131 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 CD7P09564 240 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 KIR3DS1Q14943 382 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 AMMECR1LQ6DCA0 310 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 IGHV4-4A0A075B6R2 117 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 NRACQ8N912 160 aa10.3□□□□□ -0.76
CDH8-201ENST00000299345 TRAV12-3A0A0B4J271 114 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 SOCS3O14543 225 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 K7EMT4 169 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 PPP1R17O96001 155 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 GCSHP23434 173 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
CDH8-201ENST00000299345 NAV2Q8IVL1 2488 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 TRAV8-6A0A0B4J262 113 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 PRB1P04280 392 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
CDH8-201ENST00000299345 RNF223E7ERA6 249 aa10.28□□□□□ -0.76
CDH8-201ENST00000299345 SYNJ2BPP57105 145 aa10.28□□□□□ -0.76
CDH8-201ENST00000299345 PTPN13Q12923 2485 aa10.28□□□□□ -0.76
CDH8-201ENST00000299345 SCGB2A2Q13296 93 aa10.28□□□□□ -0.76
CDH8-201ENST00000299345 J3QLI3 93 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 C10orf99Q6UWK7 81 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 RPL39LQ96EH5 51 aaKnown RBP10.27□□□□□ -0.77
CDH8-201ENST00000299345 DUX5Q96PT3 197 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 SIVA1O15304 175 aa10.27□□□□□ -0.77
CDH8-201ENST00000299345 FGF6P10767 208 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms