RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 GAGE6Q13070 117 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 CENPVL3A0A0U1RRI6 287 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 SIVA1O15304 175 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 ZFAND6Q6FIF0 208 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 TMEM249Q2WGJ8 235 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 PTH2Q96A98 100 aa11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
TNFRSF11A-201ENST00000269485 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
TNFRSF11A-201ENST00000269485 GTSCR1Q86UQ5 136 aa11.04□□□□□ -0.64
TNFRSF11A-201ENST00000269485 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
TNFRSF11A-201ENST00000269485 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
TNFRSF11A-201ENST00000269485 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
TNFRSF11A-201ENST00000269485 PSG8Q9UQ74 426 aa11.04□□□□□ -0.64
TNFRSF11A-201ENST00000269485 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 AVPP01185 164 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 EVI2AP22794 236 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 TWIST1Q15672 202 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 TRBV7-9A0A0J9YWB2 115 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 TEX22C9J3V5 150 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 H7C2G1 150 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 OVOL3O00110 214 aa11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 LINC00322Q6ZN03 302 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 TNFRSF13BO14836 293 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 LOXL1Q08397 574 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF11A-201ENST00000269485 K7EIM0 57 aa11.02□□□□□ -0.64
TNFRSF11A-201ENST00000269485 M0R381 172 aa11.02□□□□□ -0.64
TNFRSF11A-201ENST00000269485 Q6ZQT7 251 aa11.02□□□□□ -0.64
TNFRSF11A-201ENST00000269485 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 LTAP01374 205 aa11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 EDN2P20800 178 aa11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 OR9G4Q8NGQ1 327 aa11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 RPP21Q9H633 154 aaKnown RBP11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 C11orf71Q6IPW1 123 aa11.02□□□□□ -0.65
TNFRSF11A-201ENST00000269485 FAM90A9PA6NNJ1 464 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 FXYD5Q96DB9 178 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 Q96MF0 132 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 LMO4P61968 165 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 SCGB1D4Q6XE38 83 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 C8orf46Q8TAG6 207 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 F5H697 171 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 SNCGO76070 127 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 POU2AF1Q16633 256 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 FAM74A4Q5TZK3 123 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 WIPF2Q8TF74 440 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 FAM167A-AS1Q96KT0 104 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 C1QTNF4Q9BXJ3 329 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 STAB1Q9NY15 2570 aa11.01□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TCRAP04437 139 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 ZNF688P0C7X2 276 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 PRELID3AQ96N28 172 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 DKK2Q9UBU2 259 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TMEM213A2RRL7 107 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 PRAC2D3DTV9 90 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 F8W1H4 67 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 MGPP08493 103 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 GAGE2BQ13066 116 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 GAGE2EQ4V326 116 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 LINC00311Q8N616 119 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 SMPXQ9UHP9 88 aa11□□□□□ -0.65
TNFRSF11A-201ENST00000269485 COL6A5A8TX70 2615 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TRAV41A0A0B4J266 112 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 RIGQ13278 110 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 RBPMS2Q6ZRY4 209 aaKnown RBP10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TTC9CQ8N5M4 171 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 ZNF491Q8N8L2 437 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 IFI27L1Q96BM0 104 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 IGLV2-8P01709 118 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TMEM30BQ3MIR4 351 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 GPR82Q96P67 336 aa10.99□□□□□ -0.65
TNFRSF11A-201ENST00000269485 MSMBP08118 114 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 CKS2P33552 79 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 C11orf52Q96A22 123 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TCTEX1D4Q5JR98 221 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 METTL26Q96S19 204 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 FOXC2Q99958 501 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 ZNF747Q9BV97 191 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 LINC00574Q9H8X3 128 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 ID1P41134 155 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 Q8N9W7 124 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 NDFIP1Q9BT67 221 aa10.98□□□□□ -0.65
TNFRSF11A-201ENST00000269485 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 FANCD2OSQ96PS1 177 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 DTX2Q86UW9 622 aa10.97□□□□□ -0.65
TNFRSF11A-201ENST00000269485 MUC4Q99102 2169 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms