RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 PLXND1Q9Y4D7 1925 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 CACNA1GO43497 2377 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 UBE2BP63146 152 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 SPRNQ5BIV9 151 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 IGLC7A0M8Q6 106 aa13.27□□□□□ -0.28
TSPAN3-201ENST00000267970 NDUFC2O95298 119 aa13.27□□□□□ -0.28
TSPAN3-201ENST00000267970 Q6ZS49 121 aa13.27□□□□□ -0.28
TSPAN3-201ENST00000267970 FNDC10F2Z333 226 aa13.27□□□□□ -0.29
TSPAN3-201ENST00000267970 YPEL3P61236 119 aaPredicted RBP13.27□□□□□ -0.29
TSPAN3-201ENST00000267970 C8orf31Q8N9H6 132 aa13.27□□□□□ -0.29
TSPAN3-201ENST00000267970 U3KQE9 123 aa13.27□□□□□ -0.29
TSPAN3-201ENST00000267970 LOXP28300 417 aaPredicted RBP13.26□□□□□ -0.29
TSPAN3-201ENST00000267970 RNF114Q9Y508 228 aa13.26□□□□□ -0.29
TSPAN3-201ENST00000267970 EP300Q09472 2414 aaPredicted RBP13.26□□□□□ -0.29
TSPAN3-201ENST00000267970 CHD3Q12873 2000 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-201ENST00000267970 GTF3C1Q12789 2109 aa13.26□□□□□ -0.29
TSPAN3-201ENST00000267970 IGLV3-9A0A075B6K5 115 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 PRSS47A8MTI9 375 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 WNK2Q9Y3S1 2297 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 RITA1Q96K30 269 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 ORMDL1Q9P0S3 153 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 CFC1BP0CG36 223 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 CFC1P0CG37 223 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 RNF183Q96D59 192 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 USF3Q68DE3 2245 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 TIMM17AQ99595 171 aa13.25□□□□□ -0.29
TSPAN3-201ENST00000267970 TCF20Q9UGU0 1960 aaKnown RBP13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 IGHV2-70DA0A0C4DH43 119 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 A0A0U1RQV1 116 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 NCR3O14931 201 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 MSRB1Q9NZV6 116 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 MPLKIPQ8TAP9 179 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 TRAV4A0A0B4J268 109 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 RNASE8Q8TDE3 154 aaKnown RBP13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 C1orf147Q96MC9 270 aaPredicted RBP13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 IGHV3-30P01768 117 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 IGHV3-33P01772 117 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 IGHV3-30-5P0DP03 117 aa13.24□□□□□ -0.29
TSPAN3-201ENST00000267970 C22orf46C9J442 243 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 C15orf65H3BRN8 121 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 WFDC2Q14508 124 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 WFDC11Q8NEX6 87 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 CR1LQ2VPA4 569 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 FOXL2NBQ6ZUU3 175 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 ABCA4P78363 2273 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 ACYP1P07311 99 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 HERVK_113P63121 156 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 CRIPAKQ8N1N5 446 aa13.23□□□□□ -0.29
TSPAN3-201ENST00000267970 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
TSPAN3-201ENST00000267970 C17orf82Q86X59 251 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-201ENST00000267970 PKDREJQ9NTG1 2253 aa13.22□□□□□ -0.29
TSPAN3-201ENST00000267970 PSMB8P28062 276 aa13.22□□□□□ -0.29
TSPAN3-201ENST00000267970 DEFB1P60022 68 aa13.22□□□□□ -0.29
TSPAN3-201ENST00000267970 PROK2Q9HC23 129 aa13.22□□□□□ -0.29
TSPAN3-201ENST00000267970 NDUFA4O00483 81 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 LTAP01374 205 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 ZNF493Q6ZR52 646 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 MUSTN1Q8IVN3 82 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 ZNF747Q9BV97 191 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 Q6ZS92 163 aa13.21□□□□□ -0.29
TSPAN3-201ENST00000267970 ARHGAP21Q5T5U3 1957 aa13.21□□□□□ -0.3
TSPAN3-201ENST00000267970 HOXB4P17483 251 aaPredicted RBP13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 C10orf91Q5T1B1 145 aa13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 NPBQ8NG41 125 aa13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 BUB3O43684 328 aa13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 PLA2G5P39877 138 aa13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 SLURP1P55000 103 aa13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
TSPAN3-201ENST00000267970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■□□ 15.9
TSPAN3-201ENST00000267970 RPL39P62891 51 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 RSPO1Q2MKA7 263 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 AGPAT4-IT1Q9H0P7 198 aa13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 DEFB4AO15263 64 aa13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 ANKRD39Q53RE8 183 aa13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 LMO1P25800 156 aa13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 DKK4Q9UBT3 224 aa13.19□□□□□ -0.3
TSPAN3-201ENST00000267970 NOTCH3Q9UM47 2321 aa13.18□□□□□ -0.3
TSPAN3-201ENST00000267970 FAM231DQ6ZW35 169 aa13.18□□□□□ -0.3
TSPAN3-201ENST00000267970 CLEC2BQ92478 149 aa13.18□□□□□ -0.3
TSPAN3-201ENST00000267970 IGLL5B9A064 214 aa13.18□□□□□ -0.3
TSPAN3-201ENST00000267970 ZFP2Q6ZN57 461 aa13.18□□□□□ -0.3
TSPAN3-201ENST00000267970 IGHV4OR15-8A0A075B7B6 117 aa13.17□□□□□ -0.3
TSPAN3-201ENST00000267970 A0A087WW49 117 aa13.17□□□□□ -0.3
TSPAN3-201ENST00000267970 J3KT08 172 aa13.17□□□□□ -0.3
TSPAN3-201ENST00000267970 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
TSPAN3-201ENST00000267970 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
TSPAN3-201ENST00000267970 E9PQ18 207 aa13.17□□□□□ -0.3
TSPAN3-201ENST00000267970 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
TSPAN3-201ENST00000267970 EML6Q6ZMW3 1958 aa13.16□□□□□ -0.3
TSPAN3-201ENST00000267970 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
TSPAN3-201ENST00000267970 FRMD6-AS1P0C7T7 363 aa13.16□□□□□ -0.3
TSPAN3-201ENST00000267970 APOC4P55056 127 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms