RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 BAGE2Q86Y30 109 aa13.34□□□□□ -0.27
CYSTM1-201ENST00000261811 LYPD6BQ8NI32 183 aa13.34□□□□□ -0.27
CYSTM1-201ENST00000261811 FAM210BQ96KR6 192 aa13.34□□□□□ -0.27
CYSTM1-201ENST00000261811 TP53TG3Q9ULZ0 132 aa13.34□□□□□ -0.27
CYSTM1-201ENST00000261811 RBFOX3A6NFN3 312 aa13.33□□□□□ -0.28
CYSTM1-201ENST00000261811 IGLL5B9A064 214 aa13.33□□□□□ -0.28
CYSTM1-201ENST00000261811 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
CYSTM1-201ENST00000261811 MED9Q9NWA0 146 aa13.33□□□□□ -0.28
CYSTM1-201ENST00000261811 DNAH7Q8WXX0 4024 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 GAGE7O76087 117 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 ZC2HC1AQ96GY0 325 aa13.32□□□□□ -0.28
CYSTM1-201ENST00000261811 ORM1P02763 201 aa13.31□□□□□ -0.28
CYSTM1-201ENST00000261811 GNRH2O43555 120 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 SPINK4O60575 86 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 TYMSP04818 313 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 SMIM12Q96EX1 92 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 NDUFAF3Q9BU61 184 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 EIF5A2Q9GZV4 153 aaKnown RBP13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 MDFICQ9P1T7 246 aa13.3□□□□□ -0.28
CYSTM1-201ENST00000261811 IGHV3-16A0A0C4DH30 117 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 F5H768 121 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 S100A4P26447 101 aaKnown RBP13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 GNG4P50150 75 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 ZNF674Q2M3X9 581 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 Q6ZTI0 123 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 BIN3Q9NQY0 253 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 CSMD3Q7Z407 3707 aa13.29□□□□□ -0.28
CYSTM1-201ENST00000261811 IGHV4-4A0A075B6R2 117 aa13.28□□□□□ -0.28
CYSTM1-201ENST00000261811 B4DEV8 164 aa13.28□□□□□ -0.28
CYSTM1-201ENST00000261811 SH2D1AO60880 128 aa13.28□□□□□ -0.28
CYSTM1-201ENST00000261811 ZNF506Q5JVG8 444 aa13.28□□□□□ -0.28
CYSTM1-201ENST00000261811 NHLRC2Q8NBF2 726 aa13.28□□□□□ -0.28
CYSTM1-201ENST00000261811 C18orf15Q96N68 181 aa13.28□□□□□ -0.28
CYSTM1-201ENST00000261811 TMEM250H0YL14 139 aa13.27□□□□□ -0.29
CYSTM1-201ENST00000261811 M0R2P5 195 aa13.27□□□□□ -0.29
CYSTM1-201ENST00000261811 ASIPP42127 132 aa13.27□□□□□ -0.29
CYSTM1-201ENST00000261811 CENPWQ5EE01 88 aa13.27□□□□□ -0.29
CYSTM1-201ENST00000261811 MLST8Q9BVC4 326 aa13.27□□□□□ -0.29
CYSTM1-201ENST00000261811 MUC4Q99102 2169 aa13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 NDUFS6O75380 124 aaKnown RBP13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 RAB14P61106 215 aa13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 TOR2AQ5JU69 321 aa13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 FAM210AQ96ND0 272 aa13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 DERL1Q9BUN8 251 aa13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 MRPL16Q9NX20 251 aaKnown RBP13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 C11orf21Q9P2W6 132 aa13.26□□□□□ -0.29
CYSTM1-201ENST00000261811 M0R036 132 aa13.25□□□□□ -0.29
CYSTM1-201ENST00000261811 MGST1P10620 155 aaKnown RBP13.25□□□□□ -0.29
CYSTM1-201ENST00000261811 CRIP1P50238 77 aa13.25□□□□□ -0.29
CYSTM1-201ENST00000261811 OR5I1Q13606 314 aa13.25□□□□□ -0.29
CYSTM1-201ENST00000261811 PRR27Q6MZM9 219 aa13.25□□□□□ -0.29
CYSTM1-201ENST00000261811 RASL10AQ92737 203 aa13.25□□□□□ -0.29
CYSTM1-201ENST00000261811 KMT2CQ8NEZ4 4911 aaKnown RBP13.24□□□□□ -0.29
CYSTM1-201ENST00000261811 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
CYSTM1-201ENST00000261811 LINC01559Q495D7 138 aa13.24□□□□□ -0.29
CYSTM1-201ENST00000261811 C15orf53Q8NAA6 179 aa13.24□□□□□ -0.29
CYSTM1-201ENST00000261811 APLNQ9ULZ1 77 aa13.24□□□□□ -0.29
CYSTM1-201ENST00000261811 RAB19A4D1S5 217 aa13.23□□□□□ -0.29
CYSTM1-201ENST00000261811 KRBOX1C9JBD0 128 aa13.23□□□□□ -0.29
CYSTM1-201ENST00000261811 SLAQ13239 276 aa13.23□□□□□ -0.29
CYSTM1-201ENST00000261811 LCE6AA0A183 80 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 C9JCJ5 164 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 CEBPGP53567 150 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 ZNF876PQ49A33 203 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 NACAE9PAV3 2078 aa13.22□□□□□ -0.29
CYSTM1-201ENST00000261811 PEA15Q15121 130 aa13.21□□□□□ -0.29
CYSTM1-201ENST00000261811 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
CYSTM1-201ENST00000261811 PTH2Q96A98 100 aa13.21□□□□□ -0.29
CYSTM1-201ENST00000261811 C9orf85Q96MD7 179 aa13.21□□□□□ -0.29
CYSTM1-201ENST00000261811 PARLQ9H300 379 aa13.21□□□□□ -0.29
CYSTM1-201ENST00000261811 CIDEAO60543 219 aa13.2□□□□□ -0.3
CYSTM1-201ENST00000261811 LY6G6CO95867 125 aa13.2□□□□□ -0.3
CYSTM1-201ENST00000261811 RNASE3P12724 160 aaKnown RBP13.2□□□□□ -0.3
CYSTM1-201ENST00000261811 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
CYSTM1-201ENST00000261811 OR4C5Q8NGB2 326 aa13.2□□□□□ -0.3
CYSTM1-201ENST00000261811 SMDT1Q9H4I9 107 aa13.2□□□□□ -0.3
CYSTM1-201ENST00000261811 TMSB15BA0A087X1C1 80 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 TRAV4A0A0B4J268 109 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 TRGV4A0A0C4DH28 118 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 XKRY2A2RUG3 117 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 CXCL1P09341 107 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 P0DMU3 169 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 PCNPQ8WW12 178 aaKnown RBP13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 LINC00476Q8WZB0 136 aa13.19□□□□□ -0.3
CYSTM1-201ENST00000261811 PHLDA3Q9Y5J5 127 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms