RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 COL4A3Q01955 1670 aa3.42□□□□□ -1.86
VPS13C-202ENST00000261517 LINC00158P58513 81 aa3.42□□□□□ -1.86
VPS13C-202ENST00000261517 C18orf15Q96N68 181 aa3.42□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV3-23P01764 117 aa3.42□□□□□ -1.86
VPS13C-202ENST00000261517 Q96MF0 132 aa3.42□□□□□ -1.86
VPS13C-202ENST00000261517 IGHG4P01861 327 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TRAV5A0A0B4J249 113 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 H0YGX0 51 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 ARMS2P0C7Q2 107 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 FOXG1P55316 489 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-202ENST00000261517 PRORYQ9H606 182 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 PYY3Q5JQD4 70 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 COL6A3P12111 3177 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TCF15Q12870 199 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 CLUHP3Q96NS8 147 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TOMM7Q9P0U1 55 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 V9GYV3 84 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 SZT2Q5T011 3432 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV3OR16-10A0A075B7F0 116 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TRAV12-1A0A0B4J245 112 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 A0A1B0GV90 55 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 FCN3O75636 299 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 ADORA2A-AS1P86434 159 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 C10orf142B7Z368 130 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 H7C2G1 150 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 IGKV3-20P01619 116 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 CTRLP40313 264 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TDGF1P3P51864 188 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 NSUN5P1Q3KNT7 163 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 ZNF561-AS1K7EIQ3 104 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 OVOL3O00110 214 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 DLEU1O43261 78 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV3-48P01763 117 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 IGHG2P01859 326 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 MRPL23Q16540 153 aaKnown RBP3.41□□□□□ -1.86
VPS13C-202ENST00000261517 ZFAND6Q6FIF0 208 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 VCANP13611 3396 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TRAV12-3A0A0B4J271 114 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TRAV3A0A0B4J244 114 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TNFRSF13BO14836 293 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-202ENST00000261517 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 H3BTX0 84 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 COX8AP10176 69 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 WT1-ASQ06250 92 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 TMEM219Q86XT9 240 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 NDUFA11Q86Y39 141 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 C18orf32Q8TCD1 76 aa3.41□□□□□ -1.86
VPS13C-202ENST00000261517 MUC21Q5SSG8 566 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 EMP1P54849 157 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 RIPPLY3P57055 190 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 Q6ZRM9 215 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 ZNF491Q8N8L2 437 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 IGHV3-66A0A0C4DH42 116 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 PSCAO43653 123 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 SPINK2P20155 84 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 CCL24O00175 119 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 C10orf55Q5SWW7 151 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 LURAP1LQ8IV03 231 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 C5orf56Q8N8D9 126 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 SYNJ2BPP57105 145 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 DEFB131AP59861 70 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 PRIMA1Q86XR5 153 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 HIGD1BQ9P298 99 aa3.4□□□□□ -1.86
VPS13C-202ENST00000261517 TRAV8-2A0A0B4J237 113 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 CRLF1O75462 422 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 WI2-2373I1.2A0A1W2PRP0 233 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 BRI3O95415 125 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 SSBP2P81877 361 aaPredicted RBP3.4□□□□□ -1.87
VPS13C-202ENST00000261517 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.87
VPS13C-202ENST00000261517 FRYLO94915 3013 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV3-49A0A0A0MS15 119 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 EVI2AP22794 236 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 FAM19A2Q8N3H0 131 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 IGF2BP2-AS1Q96M15 143 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 I3L2K1 104 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 SOCS3O14543 225 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 PAX4O43316 350 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 TIMM17AQ99595 171 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 MAP1AP78559 2803 aaPredicted RBP3.4□□□□□ -1.87
VPS13C-202ENST00000261517 PLA2G5P39877 138 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 EBI3Q14213 229 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 C2orf66Q6UXQ4 117 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 C14orf178Q8N769 122 aaPredicted RBP3.4□□□□□ -1.87
VPS13C-202ENST00000261517 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 C14orf144Q96I85 54 aa3.4□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV3OR16-13A0A075B7E8 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 IGHV3-74A0A0B4J1X5 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 SDHAF1A6NFY7 115 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 VWC2LB2RUY7 222 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 RNF223E7ERA6 249 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 VSIRQ9H7M9 311 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 IGLV1-47P01700 117 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 PPDPFLQ8WWR9 84 aa3.39□□□□□ -1.87
VPS13C-202ENST00000261517 POLR3KQ9Y2Y1 108 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-202ENST00000261517 BPTFQ12830 3046 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms