RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 KRTDAPP60985 99 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 HMGN2P46Q86SG4 172 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 TMEM256Q8N2U0 113 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 TOMM5Q8N4H5 51 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 TSKUQ8WUA8 353 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 CST11Q9H112 138 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 TP73-AS1Q9UF72 201 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 HHLA3Q9XRX5 114 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 PEAK1Q9H792 1746 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 PIK3C2AO00443 1686 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 TANC1Q9C0D5 1861 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.48□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1D-43A0A0B4J1Z2 117 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 TRAV2A0A0B4J234 112 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1-12A0A0C4DH73 117 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 hADV29S1A0JD25 119 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 K7EM74 188 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1-5P01602 117 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1D-12P01611 117 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 IGLV3-25P01717 112 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 FUT5Q11128 374 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 C12orf73Q69YU5 71 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
CCDC54-201ENST00000261058 FGF13Q92913 245 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 XAGE1AQ9HD64 81 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 MANBALQ9NQG1 85 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 LINC00588Q9Y4M8 146 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 MYO3AQ8NEV4 1616 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 NWD1Q149M9 1564 aa2.48□□□□□ -2.01
CCDC54-201ENST00000261058 MAST2Q6P0Q8 1798 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 C10orf71Q711Q0 1435 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 OBSL1O75147 1896 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 ADGRB1O14514 1584 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 IGHV3-21A0A0B4J1V1 117 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 TRAV1-1A0A0B4J248 108 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 MDFIC2A0A1B0GVS7 189 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF736B4DX44 427 aaPredicted RBP2.47□□□□□ -2.01
CCDC54-201ENST00000261058 C1QAP02745 245 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 PRM2P04554 102 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 ACYP1P07311 99 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 UBE2G1P62253 170 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 SNRPFP62306 86 aaKnown RBP2.47□□□□□ -2.01
CCDC54-201ENST00000261058 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 CFAP126Q5VTH2 177 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 MIC13Q5XKP0 118 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 C7orf65Q6ZTY9 151 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 FP248Q71RG6 208 aaPredicted RBP2.47□□□□□ -2.01
CCDC54-201ENST00000261058 C5orf38Q86SI9 138 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 Q8N2B8 174 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 SERP2Q8N6R1 65 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 LINC01600Q96MT4 127 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 EPDR1Q9UM22 224 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 MICAL3Q7RTP6 2002 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 MON2Q7Z3U7 1717 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 XRN1Q8IZH2 1706 aaKnown RBP2.47□□□□□ -2.01
CCDC54-201ENST00000261058 MROH2AA6NES4 1674 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 TET3O43151 1660 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 HELZP42694 1942 aaKnown RBP2.47□□□□□ -2.01
CCDC54-201ENST00000261058 MYLKQ15746 1914 aa2.47□□□□□ -2.01
CCDC54-201ENST00000261058 PLXNA4Q9HCM2 1894 aa2.46□□□□□ -2.01
CCDC54-201ENST00000261058 DSCAMO60469 2012 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 RGPD4Q7Z3J3 1758 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 TRBV6-7A0A0A0MS04 114 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 TRAV17A0A0B4J275 112 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 LOC285095A0A1B0GVY8 99 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 BUB1B-PAK6H3BSN5 160 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 K7ERJ3 54 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 K7ERS5 55 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 TIMM17BO60830 172 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 C3orf79P0CE67 100 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 INAFM2P0DMQ5 153 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 IGHV3-30-3P0DP02 117 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 COX8AP10176 69 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 NPPCP23582 126 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 HIST1H4AP62805 103 aaKnown RBP2.46□□□□□ -2.02
CCDC54-201ENST00000261058 BSPH1Q075Z2 132 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 Q6ZQT7 251 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 BAGE3Q86Y29 109 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 BAGE2Q86Y30 109 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 RNASE6Q93091 150 aaKnown RBP2.46□□□□□ -2.02
CCDC54-201ENST00000261058 DIRC1Q969H9 104 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 ZNF714Q96N38 554 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 OR8B2Q96RD0 313 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 TRGV9Q99603 122 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 NPCDR1Q9BY65 106 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 TRAPPC1Q9Y5R8 145 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 COL24A1Q17RW2 1714 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 BRWD3Q6RI45 1802 aa2.46□□□□□ -2.02
CCDC54-201ENST00000261058 KCPQ6ZWJ8 1503 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 TRAV14DV4A0A0A6YYC5 116 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 IGHV1-3A0A0C4DH29 117 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 NUPR1O60356 82 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 ASAH2BP0C7U1 165 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 CMC4P56277 68 aaPredicted RBP2.45□□□□□ -2.02
CCDC54-201ENST00000261058 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 PCBD1P61457 104 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 LY6EQ16553 131 aa2.45□□□□□ -2.02
CCDC54-201ENST00000261058 ZFAND2AQ8N6M9 145 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms