RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SNRPD3P62318 126 aaKnown RBP16.75■□□□□ 0.27
SIX3-201ENST00000260653 ARMS2P0C7Q2 107 aa16.75■□□□□ 0.27
SIX3-201ENST00000260653 PDZD11Q5EBL8 140 aa16.75■□□□□ 0.27
SIX3-201ENST00000260653 ZFAND2AQ8N6M9 145 aa16.75■□□□□ 0.27
SIX3-201ENST00000260653 C11orf21Q9P2W6 132 aa16.75■□□□□ 0.27
SIX3-201ENST00000260653 BAHCC1Q9P281 2608 aa16.75■□□□□ 0.27
SIX3-201ENST00000260653 GRIFINA4D1Z8 144 aa16.74■□□□□ 0.27
SIX3-201ENST00000260653 NDUFAF3Q9BU61 184 aa16.74■□□□□ 0.27
SIX3-201ENST00000260653 CD33P20138 364 aa16.74■□□□□ 0.27
SIX3-201ENST00000260653 A0A1B0GUS0 222 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 IFITM10A6NMD0 228 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 APCSP02743 223 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 LINC01559Q495D7 138 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 DNLZQ5SXM8 178 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 TMEM61Q8N0U2 210 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 FAM19A4Q96LR4 140 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 A0A1B0GUT8 65 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 CRLF1O75462 422 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 Q6AWC8 147 aa16.73■□□□□ 0.27
SIX3-201ENST00000260653 PAFAH1B2P68402 229 aa16.72■□□□□ 0.27
SIX3-201ENST00000260653 LYZL1Q6UWQ5 148 aa16.72■□□□□ 0.27
SIX3-201ENST00000260653 AGRNO00468 2067 aa16.72■□□□□ 0.27
SIX3-201ENST00000260653 NIPBLQ6KC79 2804 aaeCLIP16.72■□□□□ 0.27
SIX3-201ENST00000260653 IGKV3D-20A0A0C4DH25 116 aa16.72■□□□□ 0.27
SIX3-201ENST00000260653 RPS20P60866 119 aaKnown RBP16.72■□□□□ 0.27
SIX3-201ENST00000260653 HIST3H2BBQ8N257 126 aa16.72■□□□□ 0.27
SIX3-201ENST00000260653 DYNLRB2Q8TF09 96 aa16.72■□□□□ 0.27
SIX3-201ENST00000260653 KIR3DS1Q14943 382 aa16.71■□□□□ 0.27
SIX3-201ENST00000260653 COA6Q5JTJ3 125 aaKnown RBP16.71■□□□□ 0.27
SIX3-201ENST00000260653 ADARB2-AS1A8MUL3 147 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 CRISP2P16562 243 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 MUC21A0A0G2JKD1 596 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 MUC21A0A140T8X8 626 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 MUC21Q5SSG8 566 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 FER1L6-AS1Q8NA97 138 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 JMJD1CQ15652 2540 aa16.7■□□□□ 0.26
SIX3-201ENST00000260653 GPX1P07203 203 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 IGLC6P0CF74 106 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 S100A2P29034 98 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 KRTAP10-3P60369 221 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 DEFB114Q30KQ6 69 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 PACRGQ96M98 296 aaPredicted RBP16.69■□□□□ 0.26
SIX3-201ENST00000260653 A0A0J9YX75 114 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 NSUN5P1Q3KNT7 163 aa16.69■□□□□ 0.26
SIX3-201ENST00000260653 SRIP30626 198 aa16.68■□□□□ 0.26
SIX3-201ENST00000260653 CD300EQ496F6 205 aaPredicted RBP16.68■□□□□ 0.26
SIX3-201ENST00000260653 RNASE4P34096 147 aaKnown RBP16.68■□□□□ 0.26
SIX3-201ENST00000260653 CTRLP40313 264 aa16.68■□□□□ 0.26
SIX3-201ENST00000260653 RIGQ13278 110 aa16.68■□□□□ 0.26
SIX3-201ENST00000260653 TRBV7-9A0A0J9YWB2 115 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 CBY3A6NI87 242 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 TMEM256Q8N2U0 113 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 BORCS7Q96B45 105 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 TP53TG3Q9ULZ0 132 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 F2Z2F3 143 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 SNHG12Q9BXW3 62 aa16.67■□□□□ 0.26
SIX3-201ENST00000260653 IGKV3-20P01619 116 aa16.66■□□□□ 0.26
SIX3-201ENST00000260653 EBLN2Q6P2I7 272 aa16.66■□□□□ 0.26
SIX3-201ENST00000260653 APRG1Q8IVJ8 170 aa16.66■□□□□ 0.26
SIX3-201ENST00000260653 NAGKQ9UJ70 344 aa16.66■□□□□ 0.26
SIX3-201ENST00000260653 TRAV21A0A0B4J279 112 aa16.65■□□□□ 0.26
SIX3-201ENST00000260653 KLLNB2CW77 178 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 DEFB131AP59861 70 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 CSTL1Q9H114 145 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 TRAV2A0A0B4J234 112 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 NUPR1O60356 82 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 PPBPP02775 128 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 FABP4P15090 132 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 FOXI2Q6ZQN5 318 aa16.64■□□□□ 0.25
SIX3-201ENST00000260653 A0A1B0GW15 77 aa16.63■□□□□ 0.25
SIX3-201ENST00000260653 HIST1H2BLQ99880 126 aa16.63■□□□□ 0.25
SIX3-201ENST00000260653 LINC00310P59036 64 aa16.63■□□□□ 0.25
SIX3-201ENST00000260653 Q0VG73 95 aa16.62■□□□□ 0.25
SIX3-201ENST00000260653 NTF3P20783 257 aa16.62■□□□□ 0.25
SIX3-201ENST00000260653 RNF151Q2KHN1 245 aa16.62■□□□□ 0.25
SIX3-201ENST00000260653 BAGE3Q86Y29 109 aa16.62■□□□□ 0.25
SIX3-201ENST00000260653 ALKBH7Q9BT30 221 aaPredicted RBP16.62■□□□□ 0.25
SIX3-201ENST00000260653 TENM1Q9UKZ4 2725 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 KNCNA6PVL3 124 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 M0R2Z0 102 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 GATD1Q8NB37 220 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 ODF3Q96PU9 254 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 MSRB1Q9NZV6 116 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 SERF1AO75920 110 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 TWIST1Q15672 202 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 SPAG8Q99932 426 aaPredicted RBP16.61■□□□□ 0.25
SIX3-201ENST00000260653 CNFNQ9BYD5 112 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 SIGLEC8Q9NYZ4 499 aa16.61■□□□□ 0.25
SIX3-201ENST00000260653 ZNF256Q9Y2P7 627 aaPredicted RBP16.61■□□□□ 0.25
SIX3-201ENST00000260653 LOC102724200A0A096LPH7 203 aaPredicted RBP16.6■□□□□ 0.25
SIX3-201ENST00000260653 M0R143 59 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 AMBPP02760 352 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 ANXA2RQ3ZCQ2 193 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 OR10J3Q5JRS4 329 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 C18orf32Q8TCD1 76 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 IQCJQ1A5X6 159 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 NDUFA11Q86Y39 141 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 RCHY1Q96PM5 261 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 MAP6D1Q9H9H5 199 aa16.6■□□□□ 0.25
SIX3-201ENST00000260653 TRAV12-2A0A075B6T6 113 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms