RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NOTCH2Q04721 2471 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 TRAV21A0A0B4J279 112 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 NPFFO15130 113 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 BUB3O43684 328 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 HOXB4P17483 251 aaPredicted RBP3.67□□□□□ -1.82
USP44-201ENST00000258499 PSMB2P49721 201 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 HERVK_113P61574 105 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 SMAGPQ0VAQ4 97 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 ZNF56Q15929 161 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 Q8N9W7 124 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 NPBQ8NG41 125 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 OR5A1Q8NGJ0 315 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 FAM110DQ8TAY7 271 aaPredicted RBP3.67□□□□□ -1.82
USP44-201ENST00000258499 GTSF1LQ9H1H1 148 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 CHTOPQ9Y3Y2 248 aaKnown RBP3.67□□□□□ -1.82
USP44-201ENST00000258499 LAMA5O15230 3695 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 A0A087WWL8 130 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 A0A1W2PPM0 123 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 ZNF815PA8K554 130 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 OOSP1A8MZH6 123 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 K7EP34 96 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 CD7P09564 240 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 ATP5J2P56134 94 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 CDSNQ15517 529 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 C2orf91Q6ZV80 131 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 BOD1L2Q8IYS8 172 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 ZNF292O60281 2723 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 NACAE9PAV3 2078 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 POLQO75417 2590 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 MYO18BQ8IUG5 2567 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 TRBV25-1A0A075B6N4 114 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 IGKV2D-26A0A0A0MRZ7 120 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 LY6LH3BQJ8 138 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 UCNP55089 124 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 ZNF493Q6ZR52 646 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 Q8N8P6 123 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 KIR2DL4Q99706 377 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 H3BUX3 64 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 OVOL3O00110 214 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 UBE2E1P51965 193 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 CLEC2AQ6UVW9 174 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 Q6ZQT7 251 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 DPF1Q92782 380 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 NPFFR1Q9GZQ6 430 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 CSTL1Q9H114 145 aa3.67□□□□□ -1.82
USP44-201ENST00000258499 PTPRBP23467 1997 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 TRBV7-1A0A0A6YYK4 115 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 TRAV12-3A0A0B4J271 114 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 H3BMG7 143 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 PRSS2P07478 247 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ZNF688P0C7X2 276 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
USP44-201ENST00000258499 ODF1Q14990 250 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ANXA2RQ3ZCQ2 193 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ORMDL2Q53FV1 153 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ADAMTSL5Q6ZMM2 481 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 SMPXQ9UHP9 88 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 MSRB2Q9Y3D2 182 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 SMAD5-AS1Q9Y6J3 95 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 NAV2Q8IVL1 2488 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ZFYVE26Q68DK2 2539 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 IGKV3D-20A0A0C4DH25 116 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 GNRH2O43555 120 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 IGF1P05019 195 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ID1P41134 155 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 PAX2Q02962 417 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 C2orf66Q6UXQ4 117 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 C9orf139Q6ZV77 190 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 RPL39LQ96EH5 51 aaKnown RBP3.66□□□□□ -1.82
USP44-201ENST00000258499 BEX4Q9NWD9 120 aaPredicted RBP3.66□□□□□ -1.82
USP44-201ENST00000258499 A0A096LNJ9 63 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 TRBV6-1A0A0K0K1D8 114 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 H7C1H1 209 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 PLNP26678 52 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 ADORA2A-AS1P86434 159 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 LY6G5BQ8NDX9 201 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 SMIM2Q9BVW6 85 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 RHPN1-AS1Q9BWJ2 59 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 DPH3P1Q9H4G8 78 aa3.66□□□□□ -1.82
USP44-201ENST00000258499 TEX48A0A1B0GUV7 120 aa3.65□□□□□ -1.82
USP44-201ENST00000258499 MRPS12O15235 138 aaKnown RBP3.65□□□□□ -1.82
USP44-201ENST00000258499 IGLC6P0CF74 106 aa3.65□□□□□ -1.82
USP44-201ENST00000258499 CFAP161Q6P656 301 aa3.65□□□□□ -1.82
USP44-201ENST00000258499 TMEM190Q8WZ59 177 aa3.65□□□□□ -1.82
USP44-201ENST00000258499 DUX5Q96PT3 197 aa3.65□□□□□ -1.82
USP44-201ENST00000258499 PGPEP1Q9NXJ5 209 aa3.65□□□□□ -1.82
USP44-201ENST00000258499 CENPVL3A0A0U1RRI6 287 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 HOXA3O43365 443 aaPredicted RBP3.65□□□□□ -1.83
USP44-201ENST00000258499 TRBV12-3P01733 135 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 LGALS3P17931 250 aaKnown RBP3.65□□□□□ -1.83
USP44-201ENST00000258499 GAGE13Q4V321 117 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 PSMG4Q5JS54 123 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 SAMD13Q5VXD3 122 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 SH2D6Q7Z4S9 175 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 CCDC140Q96MF4 163 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 PIMREGQ9BSJ6 248 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 ZZEF1O43149 2961 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms