RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 MCRIP2Q9BUT9 160 aaKnown RBP3.83□□□□□ -1.8
RC3H1-201ENST00000258349 ZNF581Q9P0T4 197 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE7O76087 117 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE4Q13068 117 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 IGLL1P15814 213 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 CRIPAKQ8N1N5 446 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 PRDM6Q9NQX0 595 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 PIEZO2Q9H5I5 2752 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 H3BMG7 143 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 H3BUA1 57 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 ATP6V0E1O15342 81 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 IGHG2P01859 326 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
RC3H1-201ENST00000258349 NDUFC2O95298 119 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 HERV-K104P63124 156 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 C17orf58Q2M2W7 97 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 VWC2Q2TAL6 325 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 VOPP1Q96AW1 172 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 SPINK13Q1W4C9 94 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 C12orf74Q32Q52 190 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 LYPD2Q6UXB3 125 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 Q6ZVH6 145 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 UBE2E2Q96LR5 201 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 J3QLI3 93 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 ETV2O00321 342 aaPredicted RBP3.83□□□□□ -1.8
RC3H1-201ENST00000258349 CD59P13987 128 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 SYNJ2BPP57105 145 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 SLC25A29Q8N8R3 303 aa3.83□□□□□ -1.8
RC3H1-201ENST00000258349 LINC00527Q9UJ94 153 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 KLK9Q9UKQ9 250 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 TTC28Q96AY4 2481 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 F5H768 121 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 ETDBQ3ZM63 59 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 DEFB104AQ8WTQ1 72 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 IGHV7-4-1A0A0J9YVY3 117 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 K7EN84 100 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 DEFB130BP0DP73 79 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 DEFB130AP0DP74 79 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 IGFL4Q6B9Z1 124 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 C15orf65H3BRN8 121 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 BRD3OSQ6XYD6 125 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 LENEPQ9Y5L5 61 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 E7EQL1 145 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 ATOX1O00244 68 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 NPYP01303 97 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 FOXI2Q6ZQN5 318 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 IGFBPL1Q8WX77 278 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 CACNA1AO00555 2505 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 K7EM74 188 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 IGHV1-69DA0A0B4J2H0 117 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 J3KT08 172 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 IGHV1-69P01742 117 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 SMIM20Q8N5G0 67 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 TMEM105Q8N8V8 129 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 RNF144BQ7Z419 303 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 TRAV25A0A0B4J276 109 aa3.82□□□□□ -1.8
RC3H1-201ENST00000258349 OVOL3O00110 214 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 MSMBP08118 114 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 COL8A2P25067 703 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 PFN2P35080 140 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 PRSS29PA6NIE9 313 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE5Q13069 117 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 GAGE6Q13070 117 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 LINC00205P59089 165 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 C15orf53Q8NAA6 179 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 TLN2Q9Y4G6 2542 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 BAALC-AS2P0C853 105 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 HOXB4P17483 251 aaPredicted RBP3.81□□□□□ -1.8
RC3H1-201ENST00000258349 FUSP35637 526 aaKnown RBP eCLIP3.81□□□□□ -1.8
RC3H1-201ENST00000258349 NBL1P41271 181 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 DAZ2Q13117 558 aaKnown RBP3.81□□□□□ -1.8
RC3H1-201ENST00000258349 DAZ4Q86SG3 579 aaKnown RBP3.81□□□□□ -1.8
RC3H1-201ENST00000258349 DAZ3Q9NR90 486 aaKnown RBP3.81□□□□□ -1.8
RC3H1-201ENST00000258349 IGHV3-16A0A0C4DH30 117 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 DEFB131AP59861 70 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 SPATA25Q9BR10 227 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 HAMPP81172 84 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 ATP6V0E2Q8NHE4 81 aa3.81□□□□□ -1.8
RC3H1-201ENST00000258349 TRAV12-1A0A0B4J245 112 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 SH2D6Q7Z4S9 175 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 C11orf44Q8N8P7 122 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 HIGD1BQ9P298 99 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 C22orf46C9J442 243 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 CFHR3Q02985 330 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 IL15RAQ13261 267 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 DEFB125Q8N687 156 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 ATP5G1P05496 136 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 LY6DQ14210 128 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 BPESC1Q9GZL8 116 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 F6UB75 175 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 ANXA2RQ3ZCQ2 193 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 DKK2Q9UBU2 259 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms