RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 DPF1Q92782 380 aa19.4■□□□□ 0.7
RAB40C-201ENST00000248139 FAM223BA6NKX1 122 aa19.39■□□□□ 0.7
RAB40C-201ENST00000248139 ADAMTSL5Q6ZMM2 481 aa19.39■□□□□ 0.7
RAB40C-201ENST00000248139 SMIM15Q7Z3B0 74 aa19.39■□□□□ 0.7
RAB40C-201ENST00000248139 FAM223AQ8IWN6 122 aa19.39■□□□□ 0.7
RAB40C-201ENST00000248139 IGHV4-30-2A0A087WSY4 118 aa19.39■□□□□ 0.69
RAB40C-201ENST00000248139 TMEM160Q9NX00 188 aa19.39■□□□□ 0.69
RAB40C-201ENST00000248139 RBX1P62877 108 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 RNF151Q2KHN1 245 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 PRORYQ9H606 182 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 MYO18BQ8IUG5 2567 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 K7EMI3 77 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 SFTPCP11686 197 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 TMEM95Q3KNT9 176 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 ZFAND2AQ8N6M9 145 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 TMEM8BA6NDV4 472 aa19.38■□□□□ 0.69
RAB40C-201ENST00000248139 MRPL53Q96EL3 112 aaKnown RBP19.38■□□□□ 0.69
RAB40C-201ENST00000248139 LINC01546A6NGU7 62 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 NRGNQ92686 78 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 JMJD8Q96S16 334 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 CCL19Q99731 98 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 IGSF10Q6WRI0 2623 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 RNASE4P34096 147 aaKnown RBP19.37■□□□□ 0.69
RAB40C-201ENST00000248139 C9orf139Q6ZV77 190 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 PIMREGQ9BSJ6 248 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 HIF1ANQ9NWT6 349 aa19.37■□□□□ 0.69
RAB40C-201ENST00000248139 H3BUT2 72 aa19.36■□□□□ 0.69
RAB40C-201ENST00000248139 GNRH2O43555 120 aa19.36■□□□□ 0.69
RAB40C-201ENST00000248139 C14orf178Q8N769 122 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-201ENST00000248139 OR4X2Q8NGF9 303 aa19.36■□□□□ 0.69
RAB40C-201ENST00000248139 SPOCK3Q9BQ16 436 aa19.36■□□□□ 0.69
RAB40C-201ENST00000248139 MRPL35Q9NZE8 188 aaKnown RBP19.36■□□□□ 0.69
RAB40C-201ENST00000248139 SORL1Q92673 2214 aa19.36■□□□□ 0.69
RAB40C-201ENST00000248139 ZC2HC1BQ5TFG8 222 aa19.36■□□□□ 0.69
RAB40C-201ENST00000248139 PEF1Q9UBV8 284 aaKnown RBP19.36■□□□□ 0.69
RAB40C-201ENST00000248139 AVPP01185 164 aa19.35■□□□□ 0.69
RAB40C-201ENST00000248139 IGKCP01834 107 aa19.35■□□□□ 0.69
RAB40C-201ENST00000248139 S100A4P26447 101 aaKnown RBP19.35■□□□□ 0.69
RAB40C-201ENST00000248139 SEC11AP67812 179 aa19.35■□□□□ 0.69
RAB40C-201ENST00000248139 RPL39LQ96EH5 51 aaKnown RBP19.35■□□□□ 0.69
RAB40C-201ENST00000248139 CBY1Q9Y3M2 126 aa19.35■□□□□ 0.69
RAB40C-201ENST00000248139 ANXA2RQ3ZCQ2 193 aa19.35■□□□□ 0.69
RAB40C-201ENST00000248139 ATP5J2P56134 94 aa19.34■□□□□ 0.69
RAB40C-201ENST00000248139 LAGE3Q14657 143 aa19.34■□□□□ 0.69
RAB40C-201ENST00000248139 OR10J6PQ8NGY7 276 aa19.34■□□□□ 0.69
RAB40C-201ENST00000248139 CACNA1AO00555 2505 aa19.34■□□□□ 0.69
RAB40C-201ENST00000248139 C10orf105Q8TEF2 133 aa19.34■□□□□ 0.69
RAB40C-201ENST00000248139 PPP1R14DQ9NXH3 145 aa19.34■□□□□ 0.69
RAB40C-201ENST00000248139 SOCS3O14543 225 aa19.33■□□□□ 0.69
RAB40C-201ENST00000248139 MEGF9Q9H1U4 602 aa19.33■□□□□ 0.69
RAB40C-201ENST00000248139 ZMAT4Q9H898 229 aa19.33■□□□□ 0.69
RAB40C-201ENST00000248139 NDUFA4O00483 81 aa19.33■□□□□ 0.68
RAB40C-201ENST00000248139 HSD52Q0P140 79 aa19.33■□□□□ 0.68
RAB40C-201ENST00000248139 OR9G4Q8NGQ1 327 aa19.33■□□□□ 0.68
RAB40C-201ENST00000248139 NPFFR1Q9GZQ6 430 aa19.33■□□□□ 0.68
RAB40C-201ENST00000248139 RHPN1-AS1Q9BWJ2 59 aa19.32■□□□□ 0.68
RAB40C-201ENST00000248139 IGHG2P01859 326 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 GCSHP23434 173 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 CUBNO60494 3623 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 MGPP08493 103 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 C10orf99Q6UWK7 81 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 MYOZ3Q8TDC0 251 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 CST9LQ9H4G1 147 aa19.31■□□□□ 0.68
RAB40C-201ENST00000248139 DOPEY1Q5JWR5 2465 aa19.3■□□□□ 0.68
RAB40C-201ENST00000248139 ZFYVE26Q68DK2 2539 aa19.3■□□□□ 0.68
RAB40C-201ENST00000248139 GAGE12BA1L429 117 aa19.3■□□□□ 0.68
RAB40C-201ENST00000248139 DPM2O94777 84 aa19.3■□□□□ 0.68
RAB40C-201ENST00000248139 CRIP2P52943 208 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-201ENST00000248139 LINC00477Q96M19 166 aa19.3■□□□□ 0.68
RAB40C-201ENST00000248139 PHLDA3Q9Y5J5 127 aa19.3■□□□□ 0.68
RAB40C-201ENST00000248139 A6NDX4 124 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 GAGE10A6NGK3 116 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 MUC4Q99102 2169 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 A6NDN8 102 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 FXYD2P54710 66 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 CLEC2AQ6UVW9 174 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 AP1S3Q96PC3 154 aa19.29■□□□□ 0.68
RAB40C-201ENST00000248139 IGHV4-4A0A075B6R2 117 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 PCP4P48539 62 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 NEGR1Q7Z3B1 354 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 MAPKAPK5-AS1Q8N8E1 139 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 RASL10AQ92737 203 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 CREBBPQ92793 2442 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 TRAV21A0A0B4J279 112 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 C9orf118A6NHY6 69 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 K7ERJ3 54 aa19.28■□□□□ 0.68
RAB40C-201ENST00000248139 A0A0G2JLM5 398 aa19.27■□□□□ 0.68
RAB40C-201ENST00000248139 H3BRM9 83 aa19.27■□□□□ 0.68
RAB40C-201ENST00000248139 SRSF1Q07955 248 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAB40C-201ENST00000248139 FAM208BQ5VWN6 2430 aa19.27■□□□□ 0.68
RAB40C-201ENST00000248139 SMIM2Q9BVW6 85 aa19.27■□□□□ 0.67
RAB40C-201ENST00000248139 ACACBO00763 2458 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 SIVA1O15304 175 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 ASIPP42127 132 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 AGRNO00468 2067 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 TRBV25-1A0A075B6N4 114 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 OVOL1O14753 267 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 ATP5LO75964 103 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 JPT2Q9H910 190 aa19.26■□□□□ 0.67
RAB40C-201ENST00000248139 MSMBP08118 114 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms