RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 GAGE1Q13065 139 aa13.16□□□□□ -0.3
LRFN3-201ENST00000246529 OR10J6PQ8NGY7 276 aa13.16□□□□□ -0.3
LRFN3-201ENST00000246529 CFHR3Q02985 330 aa13.15□□□□□ -0.3
LRFN3-201ENST00000246529 BRI3O95415 125 aa13.15□□□□□ -0.3
LRFN3-201ENST00000246529 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
LRFN3-201ENST00000246529 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 OR2K2Q8NGT1 345 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 DKK2Q9UBU2 259 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 A1L4Q6 167 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 LGALS9BQ3B8N2 356 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 LGALS9CQ6DKI2 356 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
LRFN3-201ENST00000246529 A0A0G2JLM5 398 aa13.13□□□□□ -0.31
LRFN3-201ENST00000246529 COX8AP10176 69 aa13.13□□□□□ -0.31
LRFN3-201ENST00000246529 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
LRFN3-201ENST00000246529 ERASQ7Z444 233 aa13.13□□□□□ -0.31
LRFN3-201ENST00000246529 OVOL1O14753 267 aa13.13□□□□□ -0.31
LRFN3-201ENST00000246529 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
LRFN3-201ENST00000246529 DAZ1Q9NQZ3 744 aaKnown RBP13.13□□□□□ -0.31
LRFN3-201ENST00000246529 M0R381 172 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 BVES-AS1Q5T3Y7 98 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 WFDC12Q8WWY7 111 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
LRFN3-201ENST00000246529 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 C2orf91Q6ZV80 131 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 SMIM15Q7Z3B0 74 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 NRACQ8N912 160 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 TMEM158Q8WZ71 300 aa13.12□□□□□ -0.31
LRFN3-201ENST00000246529 BBC3Q96PG8 261 aaPredicted RBP13.12□□□□□ -0.31
LRFN3-201ENST00000246529 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
LRFN3-201ENST00000246529 IGLV2-18A0A075B6J9 118 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 TGFAP01135 160 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 FCER1GP30273 86 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 ANXA2RQ3ZCQ2 193 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 LENEPQ9Y5L5 61 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 SMPXQ9UHP9 88 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 COX11Q9Y6N1 276 aa13.11□□□□□ -0.31
LRFN3-201ENST00000246529 ANKRD17O75179 2603 aaKnown RBP13.11□□□□□ -0.31
LRFN3-201ENST00000246529 A0A096LNT2 108 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 TRAV21A0A0B4J279 112 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 PCP4P48539 62 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 GNRH2O43555 120 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 FGF6P10767 208 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 DSCR9P59020 149 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 Q8N8P6 123 aa13.1□□□□□ -0.31
LRFN3-201ENST00000246529 SLC25A16P16260 332 aa13.09□□□□□ -0.31
LRFN3-201ENST00000246529 S100A4P26447 101 aaKnown RBP13.09□□□□□ -0.31
LRFN3-201ENST00000246529 PSMB8P28062 276 aa13.09□□□□□ -0.31
LRFN3-201ENST00000246529 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
LRFN3-201ENST00000246529 GATA3P23771 443 aa13.09□□□□□ -0.31
LRFN3-201ENST00000246529 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
LRFN3-201ENST00000246529 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
LRFN3-201ENST00000246529 SRSF1Q07955 248 aaKnown RBP eCLIP13.08□□□□□ -0.32
LRFN3-201ENST00000246529 MXRA5Q9NR99 2828 aa13.08□□□□□ -0.32
LRFN3-201ENST00000246529 CD5LO43866 347 aa13.07□□□□□ -0.32
LRFN3-201ENST00000246529 PRSS1P07477 247 aa13.07□□□□□ -0.32
LRFN3-201ENST00000246529 ASIPP42127 132 aa13.07□□□□□ -0.32
LRFN3-201ENST00000246529 C14orf178Q8N769 122 aaPredicted RBP13.07□□□□□ -0.32
LRFN3-201ENST00000246529 KRTAP10-9P60411 292 aa13.07□□□□□ -0.32
LRFN3-201ENST00000246529 CCL25O15444 150 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 NMUP48645 174 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 ODF1Q14990 250 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 PCP2Q8IVA1 136 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 TAX1BP3O14907 124 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 SMIM17P0DL12 118 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 COX6B1P14854 86 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 C12orf54Q6X4T0 127 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 PHLDA3Q9Y5J5 127 aa13.06□□□□□ -0.32
LRFN3-201ENST00000246529 FOXC2Q99958 501 aa13.05□□□□□ -0.32
LRFN3-201ENST00000246529 UBR5O95071 2799 aaPredicted RBP13.05□□□□□ -0.32
LRFN3-201ENST00000246529 RPL39LQ96EH5 51 aaKnown RBP13.05□□□□□ -0.32
LRFN3-201ENST00000246529 CBY3A6NI87 242 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 RNASE3P12724 160 aaKnown RBP13.04□□□□□ -0.32
LRFN3-201ENST00000246529 LAGE3Q14657 143 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 DPF1Q92782 380 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 ABCA12Q86UK0 2595 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 K7EMT4 169 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 MGPP08493 103 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 DUX5Q96PT3 197 aa13.04□□□□□ -0.32
LRFN3-201ENST00000246529 DOPEY2Q9Y3R5 2298 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 ZNF688P0C7X2 276 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 PTTG1IPP53801 180 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 APRG1Q8IVJ8 170 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 DEFB125Q8N687 156 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 RASL10AQ92737 203 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 IGKV2D-26A0A0A0MRZ7 120 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 C7orf71A4D174 169 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 MRAP2Q96G30 205 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
LRFN3-201ENST00000246529 HHLA3Q9XRX5 114 aa13.02□□□□□ -0.32
LRFN3-201ENST00000246529 SYNJ2BPP57105 145 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms