RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 C3orf56Q8N813 242 aa15.48■□□□□ 0.07
HOXC13-201ENST00000243056 GP9P14770 177 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 LOXL3P58215 753 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 DTX2Q86UW9 622 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 SBSPONQ8IVN8 264 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 CSDC2Q9Y534 153 aaKnown RBP15.47■□□□□ 0.07
HOXC13-201ENST00000243056 UBE2D3P61077 147 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 UBE2D2P62837 147 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 PPP1R27Q86WC6 154 aa15.47■□□□□ 0.07
HOXC13-201ENST00000243056 SAA2P0DJI9 122 aaPredicted RBP15.46■□□□□ 0.07
HOXC13-201ENST00000243056 WNK2Q9Y3S1 2297 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 IGHG4P01861 327 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 CRIP1P50238 77 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 TWIST1Q15672 202 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 LYZL1Q6UWQ5 148 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 ZNRD1Q9P1U0 126 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 APCP25054 2843 aa15.46■□□□□ 0.07
HOXC13-201ENST00000243056 A8MWV9 139 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 TCL1BO95988 128 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 RASL10AQ92737 203 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 MRPL35Q9NZE8 188 aaKnown RBP15.45■□□□□ 0.06
HOXC13-201ENST00000243056 DSCAML1Q8TD84 2053 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 H3BVH4 76 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 CCL3L1P16619 93 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 CKS2P33552 79 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 POU2AF1Q16633 256 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 RASL11BQ9BPW5 248 aa15.45■□□□□ 0.06
HOXC13-201ENST00000243056 MYMXA0A1B0GTQ4 84 aa15.44■□□□□ 0.06
HOXC13-201ENST00000243056 TGFAP01135 160 aa15.44■□□□□ 0.06
HOXC13-201ENST00000243056 HOXB4P17483 251 aaPredicted RBP15.44■□□□□ 0.06
HOXC13-201ENST00000243056 EXOC3-AS1Q8N2X6 119 aa15.44■□□□□ 0.06
HOXC13-201ENST00000243056 SPXQ9BT56 116 aa15.44■□□□□ 0.06
HOXC13-201ENST00000243056 GAS8-AS1O95177 125 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 ATP5IP56385 69 aaPredicted RBP15.43■□□□□ 0.06
HOXC13-201ENST00000243056 RUSC1-AS1Q66K80 236 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 ZANQ9Y493 2812 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 ANKRD17O75179 2603 aaKnown RBP15.43■□□□□ 0.06
HOXC13-201ENST00000243056 LINC01619G3V211 115 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 PF4V1P10720 104 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 PLA2G2AP14555 144 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 C17orf58Q2M2W7 97 aa15.43■□□□□ 0.06
HOXC13-201ENST00000243056 IGKV1-16P04430 117 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 Q6Q795 121 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 HECTD1Q9ULT8 2610 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 E7EUB6 86 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 C5orf47Q569G3 176 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 THAP8Q8NA92 274 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 CALYQ9NYX4 217 aa15.42■□□□□ 0.06
HOXC13-201ENST00000243056 TRAV8-2A0A0B4J237 113 aa15.41■□□□□ 0.06
HOXC13-201ENST00000243056 KRTAP10-9P60411 292 aa15.41■□□□□ 0.06
HOXC13-201ENST00000243056 NAV2Q8IVL1 2488 aa15.41■□□□□ 0.06
HOXC13-201ENST00000243056 ATP5LO75964 103 aa15.41■□□□□ 0.06
HOXC13-201ENST00000243056 TMEM200BQ69YZ2 307 aa15.41■□□□□ 0.06
HOXC13-201ENST00000243056 MDFICQ9P1T7 246 aa15.41■□□□□ 0.06
HOXC13-201ENST00000243056 ASIPP42127 132 aa15.4■□□□□ 0.06
HOXC13-201ENST00000243056 LINC01546A6NGU7 62 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 NDUFB3O43676 98 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 UBE2D1P51668 147 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 OTORQ9NRC9 128 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 NCBP2LA6PVI3 153 aaKnown RBP15.39■□□□□ 0.05
HOXC13-201ENST00000243056 SAA1P0DJI8 122 aaPredicted RBP15.39■□□□□ 0.05
HOXC13-201ENST00000243056 CGB3P0DN86 165 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 CGB7P0DN87 165 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 LINC01587Q99440 93 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 TRGV9Q99603 122 aa15.39■□□□□ 0.05
HOXC13-201ENST00000243056 ITPR2Q14571 2701 aa15.38■□□□□ 0.05
HOXC13-201ENST00000243056 NDUFA3O95167 84 aa15.38■□□□□ 0.05
HOXC13-201ENST00000243056 IGHV4-39P01824 125 aa15.38■□□□□ 0.05
HOXC13-201ENST00000243056 COX6B1P14854 86 aa15.38■□□□□ 0.05
HOXC13-201ENST00000243056 CCL19Q99731 98 aa15.38■□□□□ 0.05
HOXC13-201ENST00000243056 LGALS1P09382 135 aaKnown RBP15.37■□□□□ 0.05
HOXC13-201ENST00000243056 NDUFA4L2Q9NRX3 87 aa15.37■□□□□ 0.05
HOXC13-201ENST00000243056 CCDC168Q8NDH2 2452 aa15.37■□□□□ 0.05
HOXC13-201ENST00000243056 ZNF469Q96JG9 3925 aaPredicted RBP15.37■□□□□ 0.05
HOXC13-201ENST00000243056 NAV3Q8IVL0 2385 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 TRBV6-1A0A0K0K1D8 114 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 C8orf49Q96NF6 230 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 ODF3Q96PU9 254 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 TMEM126AQ9H061 195 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 J3QKU1 62 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 ERHP84090 104 aaKnown RBP15.36■□□□□ 0.05
HOXC13-201ENST00000243056 WT1-ASQ06250 92 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 OR11H6Q8NGC7 330 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 SPANXA1Q9NS26 97 aa15.36■□□□□ 0.05
HOXC13-201ENST00000243056 EFNA4P52798 201 aa15.35■□□□□ 0.05
HOXC13-201ENST00000243056 BPESC1Q9GZL8 116 aa15.35■□□□□ 0.05
HOXC13-201ENST00000243056 C10orf55Q5SWW7 151 aa15.34■□□□□ 0.05
HOXC13-201ENST00000243056 RNF185Q96GF1 192 aa15.34■□□□□ 0.05
HOXC13-201ENST00000243056 KAAG1Q9UBP8 84 aa15.34■□□□□ 0.05
HOXC13-201ENST00000243056 LYRM7Q5U5X0 104 aa15.34■□□□□ 0.05
HOXC13-201ENST00000243056 OR10J6PQ8NGY7 276 aa15.34■□□□□ 0.05
HOXC13-201ENST00000243056 CGB1A6NKQ9 187 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 TMEM75Q8N9X5 138 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 C15orf53Q8NAA6 179 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 LOC107984640A0A0U1RRK4 108 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 CD7P09564 240 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 LINC00694P0DN24 101 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 IGFBPL1Q8WX77 278 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 TIMD4Q96H15 378 aa15.33■□□□□ 0.04
HOXC13-201ENST00000243056 SLC25A39Q9BZJ4 359 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms