RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 TNRC6BQ9UPQ9 1833 aaKnown RBP12.22□□□□□ -0.45
TMEM30A-201ENST00000230461 RHODO00212 210 aa12.22□□□□□ -0.45
TMEM30A-201ENST00000230461 RIPPLY3P57055 190 aa12.22□□□□□ -0.45
TMEM30A-201ENST00000230461 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
TMEM30A-201ENST00000230461 ALKBH7Q9BT30 221 aaPredicted RBP12.22□□□□□ -0.45
TMEM30A-201ENST00000230461 C3orf79P0CE67 100 aa12.21□□□□□ -0.45
TMEM30A-201ENST00000230461 EGR2P11161 476 aaPredicted RBP12.21□□□□□ -0.45
TMEM30A-201ENST00000230461 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.45
TMEM30A-201ENST00000230461 SPAG8Q99932 426 aaPredicted RBP12.21□□□□□ -0.45
TMEM30A-201ENST00000230461 TMEM158Q8WZ71 300 aa12.21□□□□□ -0.45
TMEM30A-201ENST00000230461 DEFB130BP0DP73 79 aa12.21□□□□□ -0.46
TMEM30A-201ENST00000230461 DEFB130AP0DP74 79 aa12.21□□□□□ -0.46
TMEM30A-201ENST00000230461 RPL13AP40429 203 aaKnown RBP12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 CHTOPQ9Y3Y2 248 aaKnown RBP12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 TRBV12-3P01733 135 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 IGHG4P01861 327 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 Q6YL49 198 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 DOPEY1Q5JWR5 2465 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 C2CD3Q4AC94 2353 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 MRPL51Q4U2R6 128 aaKnown RBP12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 UNQ9165/PRO28630Q6UXU0 137 aa12.2□□□□□ -0.46
TMEM30A-201ENST00000230461 SORL1Q92673 2214 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 C2orf70A6NJV1 201 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 DNAJC9-AS1A6NH13 148 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 IGKCP01834 107 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 RNF151Q2KHN1 245 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
TMEM30A-201ENST00000230461 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
TMEM30A-201ENST00000230461 TRPT1Q86TN4 253 aaKnown RBP12.18□□□□□ -0.46
TMEM30A-201ENST00000230461 COPS9Q8WXC6 57 aa12.18□□□□□ -0.46
TMEM30A-201ENST00000230461 A8MWV9 139 aa12.18□□□□□ -0.46
TMEM30A-201ENST00000230461 H7C2G1 150 aa12.18□□□□□ -0.46
TMEM30A-201ENST00000230461 POLQO75417 2590 aa12.18□□□□□ -0.46
TMEM30A-201ENST00000230461 IGF2BP2-AS1Q96M15 143 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 PYGO2Q9BRQ0 406 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 LOC107984156A0A0G2JMH3 177 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 ARL17AQ8IVW1 177 aa12.17□□□□□ -0.46
TMEM30A-201ENST00000230461 COX6CP09669 75 aa12.16□□□□□ -0.46
TMEM30A-201ENST00000230461 Q8N6K4 173 aa12.16□□□□□ -0.46
TMEM30A-201ENST00000230461 CLPSL1A2RUU4 121 aa12.16□□□□□ -0.46
TMEM30A-201ENST00000230461 VPS25Q9BRG1 176 aa12.16□□□□□ -0.46
TMEM30A-201ENST00000230461 PLA2G2AP14555 144 aa12.16□□□□□ -0.46
TMEM30A-201ENST00000230461 NDUFAF3Q9BU61 184 aa12.16□□□□□ -0.46
TMEM30A-201ENST00000230461 A0A087WX48 190 aa12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 GNRH2O43555 120 aa12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 CD5LO43866 347 aa12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 FABP2P12104 132 aa12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 CD300EQ496F6 205 aaPredicted RBP12.15□□□□□ -0.46
TMEM30A-201ENST00000230461 RPL24P83731 157 aaKnown RBP12.15□□□□□ -0.47
TMEM30A-201ENST00000230461 MTORP42345 2549 aa12.14□□□□□ -0.47
TMEM30A-201ENST00000230461 SPXQ9BT56 116 aa12.14□□□□□ -0.47
TMEM30A-201ENST00000230461 PAX2Q02962 417 aa12.14□□□□□ -0.47
TMEM30A-201ENST00000230461 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
TMEM30A-201ENST00000230461 AZU1P20160 251 aa12.14□□□□□ -0.47
TMEM30A-201ENST00000230461 APRG1Q8IVJ8 170 aa12.14□□□□□ -0.47
TMEM30A-201ENST00000230461 APOC4P55056 127 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 Q8N8P6 123 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 WIPF2Q8TF74 440 aaPredicted RBP12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 C4orf3Q8WVX3 66 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 A0A087X0K7 114 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 IGHV3-16A0A0C4DH30 117 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 LINC00469Q8N7U9 141 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 SDHAF1A6NFY7 115 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 FN1P02751 2386 aaKnown RBP12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 TRAV26-2A0A0B4J265 109 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 LINC00587B1AMM8 73 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
TMEM30A-201ENST00000230461 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 GAGE7O76087 117 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 NPYP01303 97 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 MYCNOSP40205 109 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 C9orf47Q6ZRZ4 202 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 BBC3Q96PG8 261 aaPredicted RBP12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 CFHR3Q02985 330 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 TEX43Q6ZNM6 134 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 TANC2Q9HCD6 1990 aa12.12□□□□□ -0.47
TMEM30A-201ENST00000230461 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
TMEM30A-201ENST00000230461 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
TMEM30A-201ENST00000230461 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
TMEM30A-201ENST00000230461 TMEM61Q8N0U2 210 aa12.11□□□□□ -0.47
TMEM30A-201ENST00000230461 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
TMEM30A-201ENST00000230461 SIGLEC8Q9NYZ4 499 aa12.11□□□□□ -0.47
TMEM30A-201ENST00000230461 PLNP26678 52 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms