RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZNF295-AS1Q8N0V1 137 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 TP73-AS1Q9UF72 201 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 IGHV1-69DA0A0B4J2H0 117 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 ATP6V0E1O15342 81 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 GNLYP22749 145 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 A4D1N5 150 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 KLHL30-AS1Q8NEE0 82 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 J3KT08 172 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 K7ENP7 123 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 IGLV1-44P01699 117 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 SYNJ2BPP57105 145 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 FAM236AA0A1B0GUQ0 79 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 FAM236BA0A1B0GV22 79 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 Q6ZUT4 128 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
HCFC2-201ENST00000229330 OVOL3O00110 214 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 PRR30Q53SZ7 412 aaPredicted RBP10.84□□□□□ -0.67
HCFC2-201ENST00000229330 GDF5OSQ5U4N7 250 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 IGHV3-53P01767 116 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 C22orf46C9J442 243 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 BAALC-AS2P0C853 105 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
HCFC2-201ENST00000229330 PTH2Q96A98 100 aa10.84□□□□□ -0.67
HCFC2-201ENST00000229330 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.67
HCFC2-201ENST00000229330 RHODO00212 210 aa10.83□□□□□ -0.67
HCFC2-201ENST00000229330 RBMY1FQ15415 496 aaKnown RBP10.83□□□□□ -0.68
HCFC2-201ENST00000229330 RS1O15537 224 aa10.83□□□□□ -0.68
HCFC2-201ENST00000229330 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
HCFC2-201ENST00000229330 IGFL3Q6UXB1 125 aa10.83□□□□□ -0.68
HCFC2-201ENST00000229330 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
HCFC2-201ENST00000229330 P0C879 139 aa10.83□□□□□ -0.68
HCFC2-201ENST00000229330 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
HCFC2-201ENST00000229330 FOXE3Q13461 319 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 RHOHQ15669 191 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 OBSL1O75147 1896 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 E9PLD3 99 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 C8orf31Q8N9H6 132 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 PCNX1Q96RV3 2341 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 IGLV3-9A0A075B6K5 115 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 ICOSQ9Y6W8 199 aa10.82□□□□□ -0.68
HCFC2-201ENST00000229330 PIP4P1Q86T03 277 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 INSP01308 110 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 HAMPP81172 84 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 E7EQL1 145 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 RPL39LQ96EH5 51 aaKnown RBP10.81□□□□□ -0.68
HCFC2-201ENST00000229330 G3V318 75 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 ATOX1O00244 68 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
HCFC2-201ENST00000229330 TNRC6AQ8NDV7 1962 aaKnown RBP10.81□□□□□ -0.68
HCFC2-201ENST00000229330 SAA4P35542 130 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 Q6ZPA2 131 aa10.81□□□□□ -0.68
HCFC2-201ENST00000229330 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 PCNX2A6NKB5 2137 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 H3BUX3 64 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 HERV-K104P63124 156 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
HCFC2-201ENST00000229330 A0A0B4J2C4 111 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 TINCRA0A1B0GVN0 87 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
HCFC2-201ENST00000229330 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 ZFHX2Q9C0A1 2572 aaPredicted RBP10.8□□□□□ -0.68
HCFC2-201ENST00000229330 ABCA1O95477 2261 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 USF3Q68DE3 2245 aa10.8□□□□□ -0.68
HCFC2-201ENST00000229330 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 LY6HO94772 140 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 IGKV1-17P01599 117 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 PFN2P35080 140 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 I3L2K1 104 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 GNRH2O43555 120 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 KIF26AQ9ULI4 1882 aaPredicted RBP10.79□□□□□ -0.68
HCFC2-201ENST00000229330 HERVK_113P63121 156 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 BRD3OSQ6XYD6 125 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 RNF114Q9Y508 228 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 HTN3P15516 51 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 RNASE13Q5GAN3 156 aaKnown RBP10.79□□□□□ -0.68
HCFC2-201ENST00000229330 PIFOQ8TCI5 191 aa10.79□□□□□ -0.68
HCFC2-201ENST00000229330 NDUFA4O00483 81 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 PF4P02776 101 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 NDUFV3P56181 108 aaKnown RBP10.78□□□□□ -0.68
HCFC2-201ENST00000229330 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 PRSS33Q8NF86 280 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 BAALCQ8WXS3 180 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 TOMM6Q96B49 74 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 SS18Q15532 418 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 DOCK10Q96BY6 2186 aa10.78□□□□□ -0.68
HCFC2-201ENST00000229330 IGHV3-38A0A0C4DH36 116 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms