RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 SCGB1D4Q6XE38 83 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 FAM110DQ8TAY7 271 aaPredicted RBP13.2□□□□□ -0.3
H2AFV-201ENST00000222690 EMP1P54849 157 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 PHLDA3Q9Y5J5 127 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 SORL1Q92673 2214 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
H2AFV-201ENST00000222690 WFDC12Q8WWY7 111 aa13.19□□□□□ -0.3
H2AFV-201ENST00000222690 UBTD1Q9HAC8 227 aa13.19□□□□□ -0.3
H2AFV-201ENST00000222690 DOPEY2Q9Y3R5 2298 aa13.19□□□□□ -0.3
H2AFV-201ENST00000222690 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
H2AFV-201ENST00000222690 IGHV3-11P01762 117 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 A0A087WX48 190 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 IGLL5B9A064 214 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 TCF15Q12870 199 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 SAMD13Q5VXD3 122 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 Q8N6K4 173 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
H2AFV-201ENST00000222690 CHTOPQ9Y3Y2 248 aaKnown RBP13.18□□□□□ -0.3
H2AFV-201ENST00000222690 TRAV8-2A0A0B4J237 113 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 IGHV7-4-1A0A0J9YVY3 117 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 CLPSL1A2RUU4 121 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 ATP5G2Q06055 141 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 MINOS1Q5TGZ0 78 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 NRACQ8N912 160 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 MINOS1-NBL1R4GNA1 71 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 CELSR1Q9NYQ6 3014 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 PRR9Q5T870 116 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
H2AFV-201ENST00000222690 SPTBN4Q9H254 2564 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 F6UB75 175 aa13.17□□□□□ -0.3
H2AFV-201ENST00000222690 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
H2AFV-201ENST00000222690 SRD5A1P18405 259 aa13.16□□□□□ -0.3
H2AFV-201ENST00000222690 SMIM2Q9BVW6 85 aa13.16□□□□□ -0.3
H2AFV-201ENST00000222690 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
H2AFV-201ENST00000222690 RNASE4P34096 147 aaKnown RBP13.16□□□□□ -0.3
H2AFV-201ENST00000222690 IGLV2-18A0A075B6J9 118 aa13.16□□□□□ -0.3
H2AFV-201ENST00000222690 ARL3P36405 182 aa13.16□□□□□ -0.3
H2AFV-201ENST00000222690 LOC107984156A0A0G2JMH3 177 aa13.15□□□□□ -0.3
H2AFV-201ENST00000222690 PLNP26678 52 aa13.15□□□□□ -0.3
H2AFV-201ENST00000222690 ARL17AQ8IVW1 177 aa13.15□□□□□ -0.3
H2AFV-201ENST00000222690 H7C1H1 209 aa13.15□□□□□ -0.3
H2AFV-201ENST00000222690 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
H2AFV-201ENST00000222690 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
H2AFV-201ENST00000222690 RBAKDNA6NC62 111 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 OOSP1A8MZH6 123 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 F8VRH5 84 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 J3QR89 54 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 SUMO2P61956 95 aaKnown RBP13.14□□□□□ -0.31
H2AFV-201ENST00000222690 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
H2AFV-201ENST00000222690 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
H2AFV-201ENST00000222690 LY6EQ16553 131 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 F5H697 171 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 K7ENP7 123 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 AZU1P20160 251 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 TM2D2Q9BX73 214 aa13.14□□□□□ -0.31
H2AFV-201ENST00000222690 MRPL16Q9NX20 251 aaKnown RBP13.14□□□□□ -0.31
H2AFV-201ENST00000222690 A0A1B0GWB2 263 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 FOXI2Q6ZQN5 318 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 APOMO95445 188 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 ZNF815PA8K554 130 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 C2orf66Q6UXQ4 117 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 BPESC1Q9GZL8 116 aa13.13□□□□□ -0.31
H2AFV-201ENST00000222690 GNRH2O43555 120 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 TGFAP01135 160 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 ASIPP42127 132 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
H2AFV-201ENST00000222690 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 ADORA2A-AS1P86434 159 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 EBI3Q14213 229 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 ANXA2RQ3ZCQ2 193 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 PIFOQ8TCI5 191 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
H2AFV-201ENST00000222690 MYMXA0A1B0GTQ4 84 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 ORMDL2Q53FV1 153 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 SIGMAR1Q99720 223 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 PRADC1Q9BSG0 188 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 SIRPDQ9H106 197 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 E9PLD3 99 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 TRBV7-1A0A0A6YYK4 115 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 UBE2E1P51965 193 aa13.11□□□□□ -0.31
H2AFV-201ENST00000222690 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
H2AFV-201ENST00000222690 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
H2AFV-201ENST00000222690 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
H2AFV-201ENST00000222690 HOXA3O43365 443 aaPredicted RBP13.1□□□□□ -0.31
H2AFV-201ENST00000222690 SLC25A16P16260 332 aa13.1□□□□□ -0.31
H2AFV-201ENST00000222690 C9orf47Q6ZRZ4 202 aa13.1□□□□□ -0.31
H2AFV-201ENST00000222690 DPH3P1Q9H4G8 78 aa13.1□□□□□ -0.31
H2AFV-201ENST00000222690 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 HLA-DRB4P13762 266 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms