RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 BLCAPP62952 87 aa6.34□□□□□ -1.39
CDC27-201ENST00000066544 Q6ZS46 218 aa6.34□□□□□ -1.39
CDC27-201ENST00000066544 PEF1Q9UBV8 284 aaKnown RBP6.34□□□□□ -1.39
CDC27-201ENST00000066544 IGHV4-38-2P0DP08 117 aa6.34□□□□□ -1.4
CDC27-201ENST00000066544 S100A7P31151 101 aa6.34□□□□□ -1.4
CDC27-201ENST00000066544 LINC01559Q495D7 138 aa6.34□□□□□ -1.4
CDC27-201ENST00000066544 BOD1L2Q8IYS8 172 aa6.34□□□□□ -1.4
CDC27-201ENST00000066544 H3BUX3 64 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 JMJD8Q96S16 334 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 C14orf178Q8N769 122 aaPredicted RBP6.33□□□□□ -1.4
CDC27-201ENST00000066544 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 MRPL35Q9NZE8 188 aaKnown RBP6.33□□□□□ -1.4
CDC27-201ENST00000066544 GAGE12BA1L429 117 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 K7ERJ3 54 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 PPBPP02775 128 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 RAB9AP51151 201 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 ODF1Q14990 250 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
CDC27-201ENST00000066544 TMEM8BA6NDV4 472 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 EDN2P20800 178 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 TMEM95Q3KNT9 176 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 ANKRD17O75179 2603 aaKnown RBP6.33□□□□□ -1.4
CDC27-201ENST00000066544 IGKV3-20P01619 116 aa6.33□□□□□ -1.4
CDC27-201ENST00000066544 RNASE4P34096 147 aaKnown RBP6.32□□□□□ -1.4
CDC27-201ENST00000066544 ITLN2Q8WWU7 325 aaPredicted RBP6.32□□□□□ -1.4
CDC27-201ENST00000066544 MOB4Q9Y3A3 225 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 ZNF462Q96JM2 2506 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 COX8CQ7Z4L0 72 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 TRBV7-1A0A0A6YYK4 115 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 A6NDN8 102 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 NRGNQ92686 78 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
CDC27-201ENST00000066544 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 SAP30O75446 220 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 CUBNO60494 3623 aa6.32□□□□□ -1.4
CDC27-201ENST00000066544 GNRH2O43555 120 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 IGKCP01834 107 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 FXYD2P54710 66 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 SEC11AP67812 179 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 IGSF10Q6WRI0 2623 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 A0A0G2JLM5 398 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 HSD52Q0P140 79 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 PHLDA3Q9Y5J5 127 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 IGHV1-69DA0A0B4J2H0 117 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 IGHV1-69P01742 117 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 Q8N8P6 123 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 OR1N2Q8NGR9 330 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 OR10J6PQ8NGY7 276 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 PIFOQ8TCI5 191 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 NHP2Q9NX24 153 aaKnown RBP6.31□□□□□ -1.4
CDC27-201ENST00000066544 ANXA2RQ3ZCQ2 193 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 OCIAD2Q56VL3 154 aa6.31□□□□□ -1.4
CDC27-201ENST00000066544 DPM2O94777 84 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 ADAMTSL5Q6ZMM2 481 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 CNFNQ9BYD5 112 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 EMP1P54849 157 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 ATP5J2P56134 94 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 LAGE3Q14657 143 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 MAPK1IP1LQ8NDC0 245 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 OR9G4Q8NGQ1 327 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 TMEM190Q8WZ59 177 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 NACAE9PAV3 2078 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 NRACQ8N912 160 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 OR4X2Q8NGF9 303 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 RBAKDNA6NC62 111 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 GPHB5Q86YW7 130 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 MAPKAPK5-AS1Q8N8E1 139 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 DPF1Q92782 380 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 CHAC1Q9BUX1 264 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 RHPN1-AS1Q9BWJ2 59 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 JPT2Q9H910 190 aa6.3□□□□□ -1.4
CDC27-201ENST00000066544 TRBV25-1A0A075B6N4 114 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 ARL6IP6Q8N6S5 226 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 C9orf47Q6ZRZ4 202 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 C9orf139Q6ZV77 190 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 NPFFR1Q9GZQ6 430 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 IGHV4-30-2A0A087WSY4 118 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 C10orf99Q6UWK7 81 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 ZFAND2AQ8N6M9 145 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 PSMG3-AS1Q96PY0 264 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 SCGB3A1Q96QR1 104 aa6.29□□□□□ -1.4
CDC27-201ENST00000066544 F5H697 171 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 MTURNQ8N3F0 131 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 U3KQE9 123 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 IGLV2-18A0A075B6J9 118 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 H3BRM9 83 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 RIPPLY3P57055 190 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 SMIM2Q9BVW6 85 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 JMJD1CQ15652 2540 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 ATP5LO75964 103 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 ASIPP42127 132 aa6.28□□□□□ -1.4
CDC27-201ENST00000066544 GTF2H5Q6ZYL4 71 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms