RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 IFNA7P01567 189 aa13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TCL1AP56279 114 aa13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TMEM88Q6PEY1 159 aa13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 LINC00612Q8N6U2 182 aa13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 PSG8Q9UQ74 426 aa13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 KLF12Q9Y4X4 402 aa13.26□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TRAV21A0A0B4J279 112 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 FLI1Q01543 452 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 DPPA3Q6W0C5 159 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 Q6ZTI0 123 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 PRNTQ86SH4 94 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TMEM75Q8N9X5 138 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
TRAPPC6A-201ENST00000006275 FBLL1A6NHQ2 334 aaKnown RBP13.24□□□□□ -0.29
TRAPPC6A-201ENST00000006275 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
TRAPPC6A-201ENST00000006275 MBD3L1Q8WWY6 194 aa13.24□□□□□ -0.29
TRAPPC6A-201ENST00000006275 NAGKQ9UJ70 344 aa13.24□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TRGV1A0A0A0MS02 117 aa13.23□□□□□ -0.29
TRAPPC6A-201ENST00000006275 A0A1B0GV50 99 aa13.23□□□□□ -0.29
TRAPPC6A-201ENST00000006275 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
TRAPPC6A-201ENST00000006275 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
TRAPPC6A-201ENST00000006275 LRP1BQ9NZR2 4599 aa13.23□□□□□ -0.29
TRAPPC6A-201ENST00000006275 HERC1Q15751 4861 aa13.23□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TRGV11A0A075B6L2 103 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TRGV2A0A075B6R0 118 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TRAV34A0A0B4J273 112 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 PEX7O00628 323 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 H2AFB1P0C5Y9 115 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 PPT1P50897 306 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 FAM3BP58499 235 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TMEM183BQ1AE95 376 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 CST9LP1Q5W188 147 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TMEM183AQ8IXX5 376 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 HIST1H2BAQ96A08 127 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 LINC00479Q96M42 142 aa13.22□□□□□ -0.29
TRAPPC6A-201ENST00000006275 SPINK4O60575 86 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 OR5I1Q13606 314 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 ZFP69Q49AA0 526 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 SMUG1Q53HV7 270 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 SAPCD1Q5SSQ6 148 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 C6orf223Q8N319 242 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 MDFICQ9P1T7 246 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 ARL2-SNX15V9GYD0 113 aa13.21□□□□□ -0.29
TRAPPC6A-201ENST00000006275 PAGE4O60829 102 aa13.2□□□□□ -0.3
TRAPPC6A-201ENST00000006275 GCGP01275 180 aa13.2□□□□□ -0.3
TRAPPC6A-201ENST00000006275 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
TRAPPC6A-201ENST00000006275 SLC51BQ86UW2 128 aa13.2□□□□□ -0.3
TRAPPC6A-201ENST00000006275 RAB5CP51148 216 aa13.19□□□□□ -0.3
TRAPPC6A-201ENST00000006275 ZNF80P51504 273 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC6A-201ENST00000006275 KCNS1Q96KK3 526 aa13.19□□□□□ -0.3
TRAPPC6A-201ENST00000006275 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
TRAPPC6A-201ENST00000006275 SDF2L1Q9HCN8 221 aa13.19□□□□□ -0.3
TRAPPC6A-201ENST00000006275 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
TRAPPC6A-201ENST00000006275 NBDYA0A0U1RRE5 68 aa13.18□□□□□ -0.3
TRAPPC6A-201ENST00000006275 GNRH2O43555 120 aa13.18□□□□□ -0.3
TRAPPC6A-201ENST00000006275 NUDT3O95989 172 aa13.18□□□□□ -0.3
TRAPPC6A-201ENST00000006275 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
TRAPPC6A-201ENST00000006275 SPXQ9BT56 116 aa13.18□□□□□ -0.3
TRAPPC6A-201ENST00000006275 TYMSP04818 313 aa13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 HOXA5P20719 270 aa13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 UBE2G1P62253 170 aa13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 SPATA12Q7Z6I5 190 aa13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 Q86TA4 180 aa13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 APOBP04114 4563 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6A-201ENST00000006275 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
TRAPPC6A-201ENST00000006275 IGHV3-16A0A0C4DH30 117 aa13.16□□□□□ -0.3
TRAPPC6A-201ENST00000006275 A0A1B0GVG6 124 aa13.16□□□□□ -0.3
TRAPPC6A-201ENST00000006275 AKR1C3P42330 323 aa13.16□□□□□ -0.3
TRAPPC6A-201ENST00000006275 SULT1A2P50226 295 aa13.16□□□□□ -0.3
TRAPPC6A-201ENST00000006275 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
TRAPPC6A-201ENST00000006275 A0A0J9YY99 117 aa13.15□□□□□ -0.3
TRAPPC6A-201ENST00000006275 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
TRAPPC6A-201ENST00000006275 C11orf21Q9P2W6 132 aa13.15□□□□□ -0.3
TRAPPC6A-201ENST00000006275 TEX46H3BTG2 121 aa13.14□□□□□ -0.31
TRAPPC6A-201ENST00000006275 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
TRAPPC6A-201ENST00000006275 ZNRF2Q8NHG8 242 aa13.14□□□□□ -0.31
TRAPPC6A-201ENST00000006275 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
TRAPPC6A-201ENST00000006275 DNAH5Q8TE73 4624 aa13.13□□□□□ -0.31
TRAPPC6A-201ENST00000006275 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
TRAPPC6A-201ENST00000006275 RASL10AQ92737 203 aa13.13□□□□□ -0.31
TRAPPC6A-201ENST00000006275 MANBALQ9NQG1 85 aa13.13□□□□□ -0.31
TRAPPC6A-201ENST00000006275 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
TRAPPC6A-201ENST00000006275 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
TRAPPC6A-201ENST00000006275 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
TRAPPC6A-201ENST00000006275 M0R2P5 195 aa13.12□□□□□ -0.31
TRAPPC6A-201ENST00000006275 CCL20P78556 96 aa13.12□□□□□ -0.31
TRAPPC6A-201ENST00000006275 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
TRAPPC6A-201ENST00000006275 EPM2AB3EWF7 344 aa13.1□□□□□ -0.31
TRAPPC6A-201ENST00000006275 H3BNG1 76 aa13.1□□□□□ -0.31
TRAPPC6A-201ENST00000006275 LTAP01374 205 aa13.1□□□□□ -0.31
TRAPPC6A-201ENST00000006275 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
TRAPPC6A-201ENST00000006275 CCL18P55774 89 aa13.1□□□□□ -0.31
TRAPPC6A-201ENST00000006275 ZC2HC1AQ96GY0 325 aa13.1□□□□□ -0.31
TRAPPC6A-201ENST00000006275 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms