RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 ATRAIDQ6UW56 229 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 LYPD6Q86Y78 171 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 TMEM61Q8N0U2 210 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 DLX4Q92988 240 aaPredicted RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 IGF2BP2-AS1Q96M15 143 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 COL5A1P20908 1838 aaPredicted RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 TRBV6-1A0A0K0K1D8 114 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 TMEM213A2RRL7 107 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 SMIM1B2RUZ4 78 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 CTSGP08311 255 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 BEAN1Q3B7T3 259 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 MRPL51Q4U2R6 128 aaKnown RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 HIST3H2BBQ8N257 126 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 MBD6Q96DN6 1003 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 SPCS1Q9Y6A9 102 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 U3KQE9 123 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 V9GYV3 84 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 SDHAF1A6NFY7 115 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 SMKR1H3BMG3 65 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 SYS1-DBNDD2H3BUS1 97 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 TSPAN13O95857 204 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 CCL18P55774 89 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 GAGE6Q13070 117 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 DEFB136Q30KP8 78 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 MRPL52Q86TS9 123 aaKnown RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 PIFOQ8TCI5 191 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 FNDC4Q9H6D8 234 aaPredicted RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 SMAD5-AS1Q9Y6J3 95 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 HEATR5BQ9P2D3 2071 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 PRB4P10163 310 aaPredicted RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 IL15RAQ13261 267 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 DYNAPQ8N1N2 210 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 TRIOBPQ9H2D6 2365 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 DAZ2Q13117 558 aaKnown RBP3.28□□□□□ -1.88
CFTR-201ENST00000003084 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 C9orf47Q6ZRZ4 202 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 DAZ4Q86SG3 579 aaKnown RBP3.28□□□□□ -1.88
CFTR-201ENST00000003084 PRIMA1Q86XR5 153 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 NRACQ8N912 160 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 DAZ3Q9NR90 486 aaKnown RBP3.28□□□□□ -1.88
CFTR-201ENST00000003084 KLF12Q9Y4X4 402 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 MDC1Q14676 2089 aaKnown RBP3.28□□□□□ -1.88
CFTR-201ENST00000003084 SNAI2O43623 268 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 HLA-DRB4P13762 266 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 TTC32Q5I0X7 151 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 AGPAT4-IT1Q9H0P7 198 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 HLA-DRB4X5D2U9 266 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 A8MWP6 167 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 IGHG4P01861 327 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BLQ99880 126 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 IGF1P05019 195 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 ESDP10768 282 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 CHAC1Q9BUX1 264 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 NHP2Q9NX24 153 aaKnown RBP3.28□□□□□ -1.88
CFTR-201ENST00000003084 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 CGB3P0DN86 165 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 APRG1Q8IVJ8 170 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 C10orf126Q8N4M7 172 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 CFHR4Q92496 578 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 ODF3Q96PU9 254 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 SPANXA1Q9NS26 97 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 SIGLEC8Q9NYZ4 499 aa3.28□□□□□ -1.88
CFTR-201ENST00000003084 ADAMTS9Q9P2N4 1935 aa3.28□□□□□ -1.89
CFTR-201ENST00000003084 KLF5Q13887 457 aaPredicted RBP3.27□□□□□ -1.89
CFTR-201ENST00000003084 SMIM2Q9BVW6 85 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 TM2D2Q9BX73 214 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 GSN-AS1Q9NRJ2 163 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 TRAV8-4A0A0B4J246 113 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 LRRK1Q38SD2 2015 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 SPRY2O43597 315 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 LY6G6DO95868 133 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 EBI3Q14213 229 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 C10orf91Q5T1B1 145 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 CYYR1Q96J86 154 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 HIST2H2BCQ6DN03 193 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 CACNA1CQ13936 2221 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 SMIM9A6NGZ8 99 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 ANGP03950 147 aaKnown RBP3.27□□□□□ -1.89
CFTR-201ENST00000003084 ATP6V0E2Q8NHE4 81 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 PLA2G2DQ9UNK4 145 aa3.27□□□□□ -1.89
CFTR-201ENST00000003084 PTPRSQ13332 1948 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 H3BUT2 72 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 GNRH2O43555 120 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 WISP2O76076 250 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 WFDC11Q8NEX6 87 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 C17orf77Q96MU5 243 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 BRCA2P51587 3418 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 LY6LH3BQJ8 138 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 C3orf79P0CE67 100 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 HERV-K104P63124 156 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 LGALS9BQ3B8N2 356 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 C18orf32Q8TCD1 76 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 ZNF479Q96JC4 524 aa3.26□□□□□ -1.89
CFTR-201ENST00000003084 MSRB1Q9NZV6 116 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms