RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 P2ry6Q9ERK9 328 aa13.14□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Aifm1Q9Z0X1 612 aa13.14□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 SelenotP62342 195 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Vdac1Q60932 296 aaKnown RBP13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Rnf144bQ8BKD6 301 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 NracQ8BNX7 165 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Trav23A0A0G2JG17 115 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 9830107B12RikD3Z5D6 160 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 BC035044E0CXF8 138 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Foxa2P35583 459 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Adam8Q05910 826 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Vkorc1l1Q6TEK5 176 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Bpifb3Q80ZU7 473 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Slamf7Q8BHK6 333 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Lrtm1Q8BXQ3 356 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Slc25a16Q8C0K5 332 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr1339Q8VGB1 315 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Vmn1r46Q9EQ45 309 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr926Q9EQ98 308 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Anapc1P53995 1944 aaKnown RBP13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 OdamA1E960 273 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 AsmtD3KU66 387 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Q6PIU9 354 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 FetubQ9QXC1 388 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm9376G3UW68 176 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 GfralQ6SJE0 393 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Ankrd55Q8BLD6 626 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Cldn10Q9Z0S6 231 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Pcnx1Q9QYC1 2344 aa13.13□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Trav18A0A075B656 109 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Ms4a13Q5FWC3 203 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 2810408A11RikQ6NSU2 435 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr1026Q7TR90 307 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Ntf4Q80VU4 209 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm12886B1AZM5 119 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm5741B2RVA4 72 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Cd52Q64389 74 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr399Q7TRX3 311 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr902E9Q6Z7 309 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm2381G3UY53 305 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Q3UZV7 1028 aa13.12□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Ighv14-3A0A075B5R9 117 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Igkv4-50A0A0B4J1J0 117 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 LfngO09010 378 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Spink11Q09TK7 88 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm5868Q8BJG1 145 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Tmem97Q8VD00 176 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr954Q9EQB6 314 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Tmem116A0A0G2JGD3 401 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Dnase2P56542 353 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Try10Q792Z1 246 aaKnown RBP13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Crispld2Q8BZQ2 495 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 MgamB5THE2 1827 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm14408E9Q6B9 136 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm10881P01642 115 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr1362Q5SZZ8 308 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Ifna11Q61716 190 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Ceacam9Q78T27 234 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr1030Q8VFL5 318 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Mpv17lQ99MS3 194 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Hspb8Q9JK92 196 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm20773A0A0A6YXW2 232 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm20807A0A0A6YXX7 232 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm20873J3QMQ9 232 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm20795J3QP49 232 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Efna4O08542 206 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Sfrp2P97299 295 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm21440Q3TTD8 232 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Psg17Q62056 475 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Rab29Q91YQ1 204 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Cacna1gQ5SUF7 2381 aa13.11□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm9Q3UKW5 162 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm5615Q3UW02 101 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Smap2Q7TN29 428 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Tmem139E9PX92 214 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Vmn1r78K7N608 313 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Acrv1P50289 261 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Trav3-3Q5R1C3 114 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm11232Q5SPI8 295 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 LgalslbQ7TPX9 165 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 TracA0A075B662 137 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gpm6bP35803 328 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Prrx2Q06348 247 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Dlx1Q64317 255 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Psg22Q810J1 475 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Olfr470Q8VF65 314 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Cldn16Q925N4 235 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Atg101Q9D8Z6 218 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Dctn5Q9QZB9 182 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Igsf11P0C673 428 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Rpl27aP14115 148 aaKnown RBP13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Trappc1Q5NCF2 145 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Rnase4Q9JJH1 148 aa13.1□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm5157A0A087WRH8 301 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Arl14eplQ3UKZ7 152 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Higd1cQ76I25 96 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Gm5148Q8BGG2 154 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 D1Ertd622eQ8VEB3 207 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Wipf3P0C7L0 485 aa13.09□□□□□ -0.31
Ccdc88b-201ENSMUST00000113440 Q8BTC1 67 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms